Acidithiobacillus ferrooxidans ATCC 23270: AFE_3294
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Entry
AFE_3294 CDS
T00810
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00521
Streptomycin biosynthesis
afr00523
Polyketide sugar unit biosynthesis
afr00541
O-Antigen nucleotide sugar biosynthesis
afr01100
Metabolic pathways
afr01110
Biosynthesis of secondary metabolites
afr01250
Biosynthesis of nucleotide sugars
Module
afr_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AFE_3294 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AFE_3294 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AFE_3294 (rfbC)
Enzymes [BR:
afr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
AFE_3294 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACK79054
UniProt:
B7JBH2
LinkDB
All DBs
Position
complement(2969256..2969804)
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AA seq
182 aa
AA seq
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MKVEALSIPEVLLIAPKVFGDVRGFFMESWNRRAFAAAGLDLDFVQDNHSRSQQGVLRGL
HYQIHQPQGKLVRVVSGAVFDVAVDLRRSSPHFGRWAGATLSAENQQMLWVPPGFAHGFY
VLSESADFLYKTTEFYAPEAERCVIWNDPDIAIDWPLVDGKPPLLATKDAAGLPLSASET
FP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcgaagccctcagcatccccgaggttctcctcatcgcccccaaggttttcggt
gacgtccggggatttttcatggaaagctggaatcgacgcgccttcgctgcggccgggctg
gacctcgacttcgtgcaggacaaccacagccgctcccagcagggcgtcctgcgcgggctg
cactatcagattcatcagccccagggcaaactggtacgtgtcgtgagcggtgcggttttc
gacgtggcggtggatctacgccgctcctcgccacacttcggacgatgggctggcgccaca
ctctccgccgaaaatcagcagatgctctgggtacctcctggtttcgcccacggcttttac
gtgctcagcgagtcggcggactttctctacaaaaccacggagttttatgccccggaagcg
gagcgctgcgtgatctggaacgacccggatatcgccatcgactggcccctggtggatggt
aagccacccctgctggccaccaaggatgccgccgggctgcctttatcggcgagtgagacc
tttccgtga
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