Aythya fuligula (tufted duck): 116487138
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Entry
116487138 CDS
T07966
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aful03016
]
116487138 (TARBP1)
03036 Chromosome and associated proteins [BR:
aful03036
]
116487138 (TARBP1)
Enzymes [BR:
aful01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
116487138 (TARBP1)
Transfer RNA biogenesis [BR:
aful03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116487138 (TARBP1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116487138 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
116487138
NCBI-ProteinID:
XP_032039650
UniProt:
A0A6J3CMI0
LinkDB
All DBs
Position
3:complement(24255073..24289430)
Genome browser
AA seq
1597 aa
AA seq
DB search
MEVVLADALLARGGDPCALLRAVCAPLSAERAEALRLLLQRLAAAEAEGEGEGQGRAAGE
ALRRAAWEVALERCRPLLRLGEGAAGGAACAERLRLGRALRGALRHCVQLCGAPLAARLA
RDALAELEGGGGGGGAAAEAAVEALAAAAPRLEEPALVARSVAAALALLRDDGEAEAAAA
LAAGRLLPALGGSGEALGRVWEGLLGAGGDPGAGEPPRAGRALLALSALCDALLPRGAAA
GPDARLCPRFWRLVQEGLAQGDGLCRRRARYLLKRAVDLCGGQAACLRCPPDGGDEPSLF
WWSAEENEALLRFWETYILVLETLEGNQIHVIKPVLPKLNSLYEHAISGEKGCWLFHPSW
HMCIYKRMFESENKTLTKEGILHFLELYETKHLPSSLGFSEFVIGPLMDALSESSLYSRT
PGQSMGACPPLGMRLQNFLATYLMLLPEEEKGSFLLKFIQKMTSRHWCAVPILFLSMALA
CIPACKVLGTDGLQALRDVLQCTMITHQILLRGAAQCYLLQTAMHLTDVEKVSLPEVSSF
ILCLRPDESLRRDTMLWIELCSWLQVNDRNFRKSVRSDFEHQETSSLYQYVRGLVVEYLK
TPASERENCFMPDWFEAKLVATMILLAADVEQMRNKSSGKSNIEWIELEAFLNPLLDVLM
KLGSNAYIPTLKTDKSLQLLLKLLQTCSLKCSNTQDDKVLSFIWKSLMTPVESILEFILR
QLTTNELSTVGDLDRCDLYLALIPEIVNLCSQVSWKKLPTIKNFILSLTNASIRNFRETN
CKEEPTLKEQIRKVISMASLTVVCEIMDRKPEAHLEALPSVDALKRFILFFQFNEVVKKP
SYTEEKSSLCEETSSQGWGKIVARYVRDQWICLRFVLNKFPMLAQEEAASELPLSIVERS
RKILQSALEALTILPSDQVLPVFNCMKVLVPKLLNSSESLCIEAFDLAWKIISSLSNTQL
IFWSNLKAFVQFIFDTEVLAVAASAKGQAYAKIKEIIFKLIDLSTTKTGVFNVVISHCCQ
SWIFPTINDRSALTDAFLNAGNYCELITEACVFGTVFRRDQRLIQDVHAFVESLGEKCAA
NVVTESTNRDDHYVRVCAIKFLCLLDGSNTLHKMFMEDIVSKLLDKDDQVSRSKTRYYAN
SLQHRIKNRIWQTLLVLLPKLEQNFLCGTLDKVFQAGFGNNQASVKYFIEWIVILSLHKY
PQFLSKFWDCFCYDEEKLKTSICTFLSVLSHFDIILQNTSEKKPVLKKALIVVLQWCFNH
NFSVRLYALVALKKIWGMCKMLHVEEFEALTPVIESSLQQVENMHGTGNARRNWQRIQDH
FFFATFHPLEDYSLETIFYTLPRLSEVAEDEWISLCKFDRFTDIPLPPTFQWYQSRTELL
DLKPSDWSQQDMGSNSVETDGQTEWTDVQKKIIPWKNSTPSLDLEMVFQDRAAKLGKSNS
RLIVVASLIDKPTNLGGLCRTSEIFGASALVVGSLHYVQDKQFQHLSVSAEQWLPLVEVK
PSQLVDYLQQKKTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDV
CVEIPQQGIIRSLNVHVSGALLIWEYTRQQVIKQKQK
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggccgacgcgctgctggcccgcggcggcgacccctgcgcgctgctg
cgggccgtgtgcgcgccgctgtcggccgagcgcgcggaggcgctgcgcctgctgctgcag
cgcctggcggcggccgaggccgagggcgagggcgagggccagggccgggcggcgggcgag
gcgctgcggcgggccgcctgggaggtggcgctggagcgctgccggccgctgctgcggctc
ggggagggggcggccgggggggcggcgtgcgccgagcggttgcggctggggcgggcgctg
cggggcgcgctgcggcactgcgtgcagctctgcggggcgccgctggccgcccgcctggcc
cgcgacgcgctggccgagctggagggaggaggcggcggcgggggggcagcagccgaggcg
gcggtggaggcgctggcggcggcggcgccgcggctggaggagccggcgctggtggcgcgg
agcgtggcggcggcgctggcgctgctgcgggacgacggcgaggccgaggcggcggcggcg
ctggcggccgggcggctgctgccggcgctgggcggcagcggcgaggcgctgggccgcgtc
tgggaggggctgctgggggccggcggcgaccccggcgcgggggagccccccagggccggg
cgggcgctgctggcgctgagcgccctgtgcgacgcgctgctgccccgcggcgcggcggcc
gggcccgacgccaggctgtgcccccgcttctggcggctggtgcaggaggggctggcgcag
ggggacgggctgtgccgcaggagggcccgctacctgctgaagagggccgtggatctctgc
gggggccaggcagcctgcctgcgctgcccccccgacggcggggacgagcccagcctcttc
tggtggtctgccgaggagaacgaggcgctgctgcggttctgggagacctacatcttggtg
ctggaaaccctggagggaaaccagatccatgtcataaagccagtattaccaaaactaaac
agtttatacgaacatgctatatcaggggaaaaaggttgttggttgtttcacccatcatgg
cacatgtgcatctacaaaagaatgtttgagagtgagaataaaacattgacaaaggaaggc
attcttcattttttagagctttatgaaacaaagcatctccccagttctcttggcttttcg
gagtttgttatcgggccgttaatggatgccctctcagaaagttccctttatagcaggaca
ccaggtcagtcaatgggagcctgtcctccactgggaatgaggctgcagaattttttggct
acttatctgatgcttcttccagaggaagaaaaaggtagtttcctgttaaagtttattcag
aagatgacaagtcggcattggtgtgctgttcccatcttgtttctttctatggctctggcg
tgtatccctgcatgtaaagtactgggcactgatggacttcaggctttaagagatgtgcta
caatgtaccatgattacacatcagattttgttgcgtggagctgctcagtgctatcttctt
caaactgcaatgcatttgacagatgtggagaaagtgtctcttccagaagtttcaagcttt
attctgtgccttagaccagatgaatcattaaggagagatactatgttatggatagagctt
tgcagttggctgcaagtgaatgacagaaacttcagaaagtctgtgcgctctgattttgag
catcaagagacatcatcactatatcagtatgtacgaggtcttgtggtagagtatcttaag
acaccagcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtt
gcaacaatgatactgttggctgctgatgtggagcagatgaggaataaatccagtggaaaa
agcaacatagaatggattgaactagaggctttcttgaaccctctgctggatgtcttgatg
aaacttggcagtaatgcttacataccaacactgaaaacagataaaagcctacagcttctc
ttgaagttattgcagacctgttcgttaaaatgttccaatacacaagatgataaagtattg
tcttttatttggaaatctctaatgacacctgtggagagtattcttgaatttatactccgt
cagcttactacaaatgaattaagtacggttggcgatctggatcgttgtgacctatactta
gccttaattccagagattgtgaatttgtgctcacaagtcagctggaaaaagttaccaact
atcaagaatttcattttgtccctcactaatgcctctattcgtaattttcgagagacaaat
tgcaaagaggagccgacacttaaagaacaaattagaaaagtaataagcatggcctcactc
acagtagtttgtgagataatggatcggaaacctgaagcacatcttgaagctctgccttct
gtggatgctctaaagagatttattttgtttttccaatttaatgaagttgtaaagaaacca
tcttacactgaagaaaaaagtagcttatgtgaagaaacatcatctcaggggtggggaaaa
attgttgcacgctatgttcgtgaccagtggatctgcctgcgttttgttttaaataagttt
ccaatgctggctcaagaagaagcagcttcagaattgcccttatctatagttgaaaggtca
agaaaaattctacagtctgcgttagaagccctaactattcttccttcagaccaagtttta
cctgtgttcaactgcatgaaagtccttgttcccaagctcctgaactcatcagaatctctc
tgcatagaagcatttgatttggcttggaaaatcatatcttcgttgagcaacacacagcta
atattttggtccaatctgaaagcatttgttcagttcatctttgatactgaggttctagct
gttgctgcaagtgcaaagggtcaagcatatgccaaaataaaagagataattttcaagctc
atagatctgtctactacaaagactggagtcttcaacgtagtcattagtcattgttgtcaa
tcttggatatttcccaccatcaatgacagaagtgctttgacagatgctttcttaaatgct
gggaattactgtgaacttatcactgaggcttgtgtctttggaactgtatttaggagggat
cagagactcatacaggatgtgcatgcctttgtagaaagccttggagaaaaatgtgccgca
aacgttgttacagaaagtacaaaccgagatgatcactatgtgagggtttgtgctattaaa
tttctgtgcttgttggatggatcaaataccttgcataagatgtttatggaagacattgtc
agcaaactacttgataaagatgatcaggtgtccagatctaaaacacgctattacgcaaac
tctttacagcacagaattaaaaaccggatatggcagacgctcttagttcttcttcctaag
ctagagcagaattttttgtgtggcacccttgacaaagtttttcaggctggatttggtaac
aatcaggcatctgtgaaatacttcatagaatggattgttatcttgagtcttcataaatat
ccccagtttcttagtaaattctgggattgcttttgctatgatgaggaaaagcttaagaca
agcatctgtacatttttatcagtgttatcacactttgacatcattcttcaaaatacctca
gagaagaagccagttctgaagaaagccctcatagtagttctacagtggtgtttcaaccat
aatttcagtgttcgactttatgcattagttgcccttaaaaaaatttggggaatgtgcaaa
atgttgcacgtggaagaatttgaagctctgacaccagtcattgaatctagccttcaacaa
gtggaaaacatgcatggcacagggaatgccagaagaaactggcagcgaatccaagatcac
ttcttctttgcaacttttcatccacttgaggactacagtctagagacaatattttacact
cttccacgcctttcagaagtggctgaggatgaatggatctcactctgtaaatttgacaga
ttcactgacattcctttgccaccaacatttcagtggtatcaatctcgaactgaacttctt
gatctaaaaccgagtgactggtctcagcaagacatgggttcaaattcagttgaaacagat
ggccaaacagaatggactgatgttcagaaaaagattataccctggaaaaacagtactcca
agtttagacctggaaatggtatttcaggaccgtgctgctaaacttggtaaatcaaacagc
aggctgattgtggtggcttcacttattgataaacctaccaatttaggaggtttgtgtcgt
acaagtgaaatatttggggcatctgcactagttgtcggcagtcttcattacgtacaagat
aaacagtttcagcatcttagtgtttctgcagagcagtggctcccccttgttgaggtgaag
ccatctcagcttgttgattatttacagcagaaaaaaacagaaggctatactattattggt
gtggaacagacagctaaaagttttgatcttacagaatattgctttccagagaagtcacta
ttattgctgggaaatgaacacgagggaatcccagcaaacctgattcaccacctggacgtt
tgtgtggaaattcctcagcagggtattattcgatcactcaatgttcatgtcagtggggct
ctgctcatttgggagtacacaaggcaacaggtgatcaagcagaaacagaaataa
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