Aythya fuligula (tufted duck): 116490407
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Entry
116490407 CDS
T07966
Symbol
DDB2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03420
Nucleotide excision repair
aful04115
p53 signaling pathway
aful04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116490407 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
116490407 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
116490407 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116490407 (DDB2)
03400 DNA repair and recombination proteins [BR:
aful03400
]
116490407 (DDB2)
Ubiquitin system [BR:
aful04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
116490407 (DDB2)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
116490407 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116490407
NCBI-ProteinID:
XP_032045430
UniProt:
A0A6J3D520
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All DBs
Position
5:complement(31619560..31633817)
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AA seq
514 aa
AA seq
DB search
MAPVNQPKDKKHERAHEYWSEEAKSSGKRKLDYKELENEPLAKKLFLRKTSKPLEKIGRS
GGGSVTRNTRALFHQLERRCSIVHYVYQNKLGGSIRAQLRQCLQLPFLRSLTSYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDIKFSPY
EAVKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHELHNVCCWYCSVDVSASCRAVVTGD
NXGHVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKDKTN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRNEIRVYSCSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDIFDGNTGEMVCQLHDPNASGIISLNK
LTLWRHTGLWHGLNILIWSREEMVMKKQEHLLKAMTEQGIGSRSLSRRGGQRQAKPRDKQ
TEAKLLSWDVEEMRTKSKDPKSQARKRKGKDLEN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtaaatcagccaaaggacaagaagcatgagagggcgcatgagtattggtca
gaagaagcaaaatcgtctgggaaaaggaaactggactacaaggaactagagaacgaacca
ctagcgaagaaattgtttctgagaaaaacatccaaacccctagagaaaattggtcggagt
ggaggtgggtctgtgacgagaaacaccagagcccttttccatcagctggagcggcggtgc
agcattgttcattatgtctaccagaacaagctgggaggctccatccgggcgcagctcagg
cagtgtctacagctgccctttctgcgttctctgacctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggagtggcatccaacacacccaagtaccgta
gccgttggttccaaaggtggagacatcattctgtgggactacgaagtacttactaaaacc
tgctttataaaagggaaagggccgggagattctcttggagacatcaagttcagtccttat
gaggcagtgaagctttatgtggcatcaggggatggcaccctaagcctgcaggaccttgag
ggcagagccgtgcaggtgatctcccgtgccccggactgtggccacgagctccataacgtt
tgttgctggtactgcagcgttgatgtttctgcaagctgccgcgctgtggtgacaggagat
aatnntgggcacgtggttctgctcagcacttctggtgaagagatttggaagctgaaattg
cacaagaagaaagtaactcatgtggagtttaactctcgatgtgagtggctgttggccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaagacaaaactaat
tttcttcatgtgcttcctcacgacaaacctgtcaatgcagcttacttcagcccaacggat
ggtgccaagctgctgagtacagaccagcgcaatgaaatcagggtttactcttgctcagac
tggaccaaaccacagcatctgatcccacacccacatcggcagttccagcacctcacacct
attaaggcgacgtggcatcctcgctatgacctcattgtagcgggtcgctacccagacccg
aagttcccagggtacacggtgaacgagctgcggactgttgatatattcgatgggaacact
ggggagatggtttgtcagctccatgacccaaatgcgtctggtatcatctcgctcaataaa
ttaaccctatggagacacactggcctctggcatgggcttaatattctgatctggagccgg
gaggagatggtgatgaagaagcaagaacatcttctgaaagccatgacagaacaggggatc
ggaagccggagtttgtccagacgtggagggcagagacaggcaaaacccagggacaagcaa
actgaagctaagttactgtcttgggatgtggaagagatgagaacaaaaagcaaagatcct
aaatcacaggcaaggaagcgaaaagggaaggatctagaaaactga
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