Aythya fuligula (tufted duck): 116493661
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Entry
116493661 CDS
T07966
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116493661 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116493661 (SIN3A)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116493661 (SIN3A)
REST complex
116493661 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116493661 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
116493661
NCBI-ProteinID:
XP_032051092
UniProt:
A0A6J3DNG7
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All DBs
Position
11:9066023..9093416
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFQHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHSTPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPQHQSQPSAQSTPTPAQ
PAPQPPPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRP
NQNGCQIRRHSGTGTTPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSL
AYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLH
QILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYY
PAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLSENSNGATGGLLASQSSRTLLEATYQRRAEQLMSEENCFKLMFIQSRGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSH
ERVSKRLHQRFQAWVDKWTKEHVTREMAAETSKWLMGEGLEGLVPCTTSCDTETLHFVSI
NKYRVKYGTIFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgcttggacgagcaggagtcacccgtgtacgcgtcgcagcagagacgtatc
accagcagcaccgaggctttccagcaccagcaccgcgtgctcgccccggccccgccggtg
tatgaggcggtttcggagaccatgcagtctgccacggggatccagtactccgtaaccccc
agctaccaggtgtcggctgtgccgcagagctcgggcagccacgggccggccatcgcggcg
gtgcacagcgggcaccaccacagcacgccggtgcagccgcacggcagccaggtggtgcaa
agccacactcacccgacgccgccggccgtgcccgtgcaggggcagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctgcagtttggtagccag
ccacaggtctacaatgacttcttggatattatgaaggaattcaaatctcaaagcattgac
actccgggagtgatcagccgtgtatcacagctcttcaagggccacccagacttgatcatg
ggcttcaacaccttcttgccacctggttacaagatcgaggtgcagacgaacgatatggtg
aacgtgacgacaccggggcaggttcaccagatccccactcacggcttacagccccagccg
cagccccagccgcagcatcagtcgcagccttcagcgcaatcaaccccaacaccagcacag
cccgcgccgcagccaccgcctgccaaaatcagtaagccatcccaactgcaggcacatacc
cctgccagccagcagactcccccgattccaccgtatgcatcgccacgctcgccgccggtc
caacctcatacacctgtgacaatctctctgggaaccacaccatccctgcagaacaatcag
cccgttgagtttaatcacgccatcaactatgtcaacaagatcaagaatcggttccaggga
cagccagacatctacaaagccttcctggagatcctccacacctaccagaaggagcagcgg
aacgccaaggaggcaggaggcaactacacgcccgctctgacggagcaggaggtgtacgcg
caggtggctcgcctcttcaaaaaccaggaggatctgctctcagagttcgggcagttcctg
cctgatgccaacagctctgtgctgttaagtaagacaactgcagagaaagtggaatcggtg
agaaacgatcacggtggcaccgtgaagaagccccagctcaacaacaagcagcagagaccc
aaccagaacggctgtcagatccgacggcactcaggaactggaacaacccctccggtcaag
aagaagccgaagctgcttggtttaaaagaccagtctttggcagaagccagcaagcatggc
gtggggacagaatctctgttctttgagaaggtccgcaaagctctgcgcagcacagaagca
tacgaaaacttcctccgctgcctggtgattttcaaccaggaggtgatctcccgggcagag
cttgtgcagctcgtctctccctttctggggaaattcccagagttgttcacttggtttaaa
aactttttggggtataaagagtctgttcacatggagacgtatccgaaggaacgggccacg
gaggggattgccatggagatagactatgcctcctgcaaaagactgggctccagctaccgc
gccttgcccaagagctaccagcaacccaagtgcacggggcggacgccgctgtgtaaagag
gttttgaacgacacctgggtctccttcccttcctggtctgaagactccacgtttgtgagc
tccaagaagacacaatacgaagagcacatctacaggtgtgaggatgagcgctttgagctg
gatgttgtcctggagaccaacctggcaacaatccgcgtccttgaggcaatccagaagaag
ctgtcacgcttgtctgccgaggagcaggccaaattccgactggacaacaccctgggcggc
acctcggaggtgatccaccgcaaggctctccagaggatatatgctgacaaagcagccgac
atcatcgatgggcttcggaagaacccctctgttgctgttcccatcgtgctgaaaaggtta
aagatgaaagaggaagagtggcgagaagcccagcgagggtttaataaagtctggcgggag
cagaacgagaaatattacctgaaatccttggaccaccagggaatcaacttcaagcagaac
gataccaaggtcctgaggtcaaagagtctcctcaatgagattgaaagcatctatgatgag
aggcaagagcaggcctcggaagacaacgccggcgtacccacaggcccgcacctatcgtta
gcctacgaagacaagcagatcctggaggatgccgcctcgctcatcatccaccacgtgaag
cggcagacgggcatccagaaagaggacaagtacaaaatcaagcagattatgtaccacttc
attccagacctgctattcgctcagcgaggtgaactctccgacgtggaggaggaggaagag
gaagaaatggacgtggacgaagctactggagctgcgaaaaagcacaacggtgttgggggc
agccctcccaaaaccaagctgatgttcaacaacacaacggcccagaagctgcggggcatg
gatgaggtctacaacctcttctacgtgaacagcaactggtacattttcatgcggctgcat
cagatcctgtgcttgcggctgctgaggatctgcacccaggccgagcggcagatcgaagag
gagacacgggaaagggagtgggagagggaagtgctgggcataaagcgagacaagagcgac
agccctgccatccagctgcggctgaaggagcccatggacatcgacgtggaggattactac
ccggccttcctggacatggtgcgcaatctgctggacgggaacatggactcgtcgcagtac
gaggactccctgcgcgagatgttcaccatccacgcctacatcgccttcaccatggacaag
ctgattcagagcatcgttcgacagctccagcacatagtgagcgacgagatctgtgtgcag
gtcacggacctctacctgtcggagaacagcaacggagccacgggaggccttctcgcctcg
cagtcctctcgtacccttctggaggccacctaccagcgcagagctgagcagctcatgtca
gaggagaactgcttcaagctgatgttcattcagagcagaggccaagttcagttaaccatt
gagctgctggacacggaagaggagaactcggatgacccagtagaagcagagcgctggtcg
gactacgtggagcggtacgtcaactccgattctacctcccccgagctccgggagcacctg
gcccagaaacctgtcttcctgccgaggaatctgaggcggatccgtaagtgtcagcgtggt
cgggagcagcaggagaaggaagggaaggagggaaacagtaagaagtccatggagaacgtg
gagagcttggacaagctggagtgtaaattcaaactgaactcctataagatggtgtacgtg
atcaaatcggaggattacatgtacaggaggaccgctctgctgcgagctcagcagtcccac
gaacgagtgagcaagcggctgcaccagcggttccaggcctgggtggacaaatggaccaag
gagcacgtcacccgcgagatggcagccgagacgagcaagtggctcatgggcgaagggttg
gagggcttggtgccctgcaccacctcctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatacggcacgatattcaagacaccgtaa
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