Aythya fuligula (tufted duck): 116494380
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Entry
116494380 CDS
T07966
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116494380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116494380
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116494380
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
116494380
NCBI-ProteinID:
XP_032052142
UniProt:
A0A6J3DRA9
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Position
13:complement(4805241..4831780)
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AA seq
562 aa
AA seq
DB search
MATELEPPAAGAVQGAAPLEAEEDEEHWLYGDDTTGKQEDGPISGHAESSHPLQDAPQES
RPVSNEDREMSQHALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPSQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGTSSSSSSHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSY
DFERDYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKR
SKEEKEASEDGAQEGEEQDAKE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggccggcgcggtgcagggcgcggcgccgctggag
gcggaggaggacgaggagcactggctgtacggggacgacaccactggcaagcaagaagat
ggaccaatttcgggacacgcagaatcttctcatcctttgcaagatgctcctcaggagagc
cggcctgtcagcaatgaagaccgagagatgtcacaacatgcccttccgagtggtgaagat
gatgaagaagacagtgatagcgacagcgatgatgatgacgtgaaggttactattggcaat
attaaaacgggagcaccatcgtacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgatttagatgcc
gcagggaatataaatggattgcctgttatagaagtggatttagattcatttgaagacaaa
ccatggaggaaaccaggggctgatctctctgattactttaattacggattcaatgaagaa
acatggaaagcttattgtgagaagcagcgacggcttcagcttgggctggatcctgctcct
cccatcagcaccgaaaataagatcacggtccagcaaggaaggacaggaaatgctgaaaaa
gaggtggaaaacaatataatcaaaacagaattcaaaacagacttcttggctctggtggga
ggacgcatgaaagctgggcctcctcctaataggaagctgggtgggacaattgatgtgatc
ggtggccaggcaggcacaattaggagagtagaaggaagacgtcgtgataagcatgcctct
gaggaaaacccaattcaggttctaggagatcatggaagcaagccacagcccccacagcag
ccccagcagccatcgcagccccagcagcccccgcagcagcagccatttgcaccaccagca
ggcccaccgccgcccccactcgccgggccacctccaccacacttcctccaccctcctcca
ccagttacttctgttccacctccactgcatcccccaggtctgccaccacccggtcctatt
ccagggctgttcccgcctcctctggcgccaccaccagctctcctcattccgacgctggat
gggcagccagccagctacaacaacaggcagcctcctccatttggctacaactctgcagat
tcaggtttcatcagctacccgcccatctccacgtcccacacgccctgggtgacgacggtg
gacaaaggcacgagcagctccagcagcagccactgggagtactcgggctccaggcgcgag
agagagagggaacgcgagcgggagagagaacgggagagagacagagaccgcacgccgacc
actagtgaatacaacaatgacgacgaacgataccgctactacagccgggagcgcagctac
gacttcgagcgcgactaccgccggagtcgagatcgcagccgggagcgggaggatcggcac
cgggagcgcaggcacagggacaaagaggagagcagcaagcataagtcttcgaggcgcaag
caacatgagagcgaggagggggagagtcaccggcgtcacaagcacaaaaagaacaagcgt
agcaaggaggagaaggaggccagcgaagacggtgcccaggagggagaggagcaggatgcc
aaggagtaa
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