Aythya fuligula (tufted duck): 116494784
Help
Entry
116494784 CDS
T07966
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116494784 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aful03041
]
116494784 (DDX46)
Enzymes [BR:
aful01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116494784 (DDX46)
Spliceosome [BR:
aful03041
]
Complex A
U2 snRNP components
U2 related factors
116494784 (DDX46)
Complex B
116494784 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
116494784
NCBI-ProteinID:
XP_032052754
UniProt:
A0A6J3DQ27
LinkDB
All DBs
Position
14:complement(16821116..16842854)
Genome browser
AA seq
1045 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNRKTENRSRSK
EKTEGVEVSKEKKKEKEDKEEEKDKDATASTVATENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKTGPTVTKVVTVVTTKKAAVETEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGFAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMGTPG
SSNAPAPSAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcattatcggaagcgctccgcgtcacggggacgctctggcagc
cggtctcgaagtcgttctccctctgacaaaaggggaaaacgcggcgaagacagacgctct
aggagcagagatcgggagcgcagacgtgagaggtcacgcagcagggacaagagaagatct
cgatcgcgtgacaggaagcgtcaaagacgttcgagaagtagagagagggaacgaagtcgg
gagagaagaagatcccgcagccgagagagaaggcgctctagaagcagaagtagaggtaga
cggtctcgatcccccagcccaagcaagaacaggaaaacagaaaacagatcaagatctaaa
gaaaagacagaaggtgtggaagtttccaaagaaaagaaaaaagagaaagaagacaaagaa
gaagagaaggataaagatgctactgcatctactgtggccactgagaattttgatcagaac
aaactggaagaagaaatgagaaaacgaaaagaaagagtggagaagtggagggaagaacaa
cgcaaaaaggctatggaaaacattggagaactgaaaaaagaaattgaagagatgaaacag
ggaaaaaagtggagtttggaagatgatgatgatgatgaagaggaaaccgcagaaggagaa
aaagaaggcaatgaggttgaagatgaagagttagatcctttggatgcttatatggaagaa
gtaaaagaagaagtcaagaaattcaatatgagaagtgtgaaaggtggaggtggaagtgaa
aagaaaactggaccaactgttaccaaagtagtaaccgtggtgacaaccaaaaaggcagct
gtagagacagaaaagaaaaaaggggagctcatggagaatgaccaagatgcaatggagtat
tcctcagaagaggaggaagttgatcttcagactgccctaactggctatcagaccaagcag
agaaagcttctagaaccagtggatcatggaaagatagaatatgagcccttcaggaaaaac
ttctacgttgaagtacctgaacttgctaaaatgactcaagaagaggtgaatgtgtaccga
ctggagatggagggaataacagtcaagggaaaaggctgccccaaaccaataaaaacctgg
gtacagtgtggtatttccatgaaaattctcactgctctcaaaaagcatggctatgaaaag
cccacgcccattcagagccaggctatcccagcaattatgaatggtcgcgacttgattggc
attgccaaaacaggaagtggaaaaacaattgcatttctgttgcccatgttcaggcatatt
atggatcagagagctttagaagaaggagaaggtcccatagctgtcatcatgacacctact
cgcgagttggctttacagattaccaaggagtgtaagaagttctcaaagacccttggactt
cgagttgtctgtgtttatggaggaacaggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgcagagtcacgtacgttgtccttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggttatgcgcattgtagacaacgtcaggcctgaccgt
cagactgtcatgttctctgctacttttcccagagccatggaggcattagctcggagaatc
ctaagtaaacctatagaagtgcaggttggaggcagaagcgttgtctgttctgatgtggag
cagcatgttattgtcatagaagaggagaacaagtttttaaagttactagagttactggga
cactatcaggagaaaggatctgttatcatatttgtagacaaacaagaacatgctgatggg
ttgttaaaagatttaatgagagcttcttatccctgcttgtctcttcatggaggtattgat
cagtacgacagggacagcataattaatgatttcaagaatggaacttgcaaacttctagtg
gccacatctgtagcagcgaggggcttggatgtaaaacagttgatgctggtggtcaattat
agttgtcccaaccattatgaagattatgtgcaccgagcaggccgaactggacgagctggc
aataaaggatttgcatatacgttcattactgaggatcaggcacgatatgctggtgatatc
attaaggctttggaattgtccgggaatccaattcctactgatttggagaagctctgggct
gacttcaaagaccagcagaaggctgagggaaagctgattaaaaaaagcagtggattctct
ggaaaaggtttcaaatttgatgaaacagaacaggctttggctaatgaaagaaagaagcta
cagaaagcagctcttggcttgcaagactcagatgatgaagatacagctgttgatattgat
gaacaaattgaaagcatgttcaattcaaagaaaagagtaaaagacatgggcacgccagga
tcatcgaatgctcctgcaccatcagctggtaatgcagagaaattggaaattgctaaaaga
ttggctttgagaatcaacgcccagaagaatcttggagcagaggcacaagtatttgtcccc
ttccactttaaggatgtgatgcagcaggcaacaaatgctatcctgagaggaggcacaatt
caagctcctactgtatctgccaagaccattgcagagcaactggctgaaaaaataaatgct
aagctgaattatgtacctatagagaagcaggaggaagagaaacaggatggaggacaaaat
gaatctttcaagagatacgaagaagaattagagatcaatgactttccacagactgccaga
tggaaagttacctccaaggaagcactacagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctccaggcaaagaacccaaggaaggagagcgaaagatt
tatttagctatagaaagtgccaatgaactggctgtacagaaagcaaaggcagaaatcaca
cgacttataaaagaggagcttattagattgcaaaactcataccaaccaaccaacaaagga
agatacaaagttctatga
DBGET
integrated database retrieval system
