Aythya fuligula (tufted duck): 116495619
Help
Entry
116495619 CDS
T07966
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03250
Viral life cycle - HIV-1
aful04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116495619 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116495619 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aful03400
]
116495619 (SAMHD1)
DNA repair and recombination proteins [BR:
aful03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116495619 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
116495619
NCBI-ProteinID:
XP_032054141
UniProt:
A0A6J3DRR2
LinkDB
All DBs
Position
16:7127923..7152940
Genome browser
AA seq
617 aa
AA seq
DB search
MGSPAAAWAETPAKRARHQDPAEGLGSPGGGGGADGDPRLWDTERLCQHLSRSGVAEPVL
SRFRESEVTGAMLLDLPACALEVAGVCLPAERLKVLACLNKLRQTVDIMKVFNDPVHGHI
EMHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRALKERQ
PELDITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLAREGLKWKHETASVKMFEHLVT
SNGLEEVMKSYGLVLEEDMIFIKEQIGGPIDENICEKSWPYHGRPKEKSFLYEIVANKKN
GIDVDKWDYFARDCHHLGIQNNFDYRRLIKFTRVCEVENEKHICARDKEVGNLYDMFHTR
NCLHRRAYQHKIGNIIEIMITEAFQKADRFFEIEGSKGKSYRISTAMEDMEAYTKLTDNI
YLEILHSSRPELNEAREILRKIERRELYKFLGETQPEKVNEIPKDEYDGLADDIANSKPE
KNPPNVDLKAEDFIVDVISMDYGMKDQNPIDNVLFYCKADPSKAVKISKEQVSRLLPRIF
AEQVIRVYCKNLDPNIVSAAKQYFVQWCIKRDFTKPQDGDVIAPHLTPMKQSWNNRSGDE
FKTTSEPSCKQRLSFNK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcccggcggcggcgtgggccgagactccggccaagcgtgcgcggcaccaggac
ccggccgaggggctcggcagccccggtggtggtggcggtgccgacggcgacccgcggctg
tgggacacggagcggctctgccagcacctctcgcgcagcggcgtggctgagcccgtcctc
agccgcttccgagagagcgaagtcaccggggccatgctgctggacctgcccgcctgcgcg
ctcgaggtcgcaggtgtctgcctcccagctgagagattgaaggtgctcgcctgcctgaac
aaactgagacagacagtggacataatgaaggtttttaatgatccagttcatgggcatatt
gaaatgcaccctcttctggttcgcatcattgacacacctcagtttcagcgcctgcgatac
attaagcagctgggtggcacttactttgtttttccaggagcctctcacaaccgctttgaa
cactctttaggggtggggtacctagcaggatgcctggtacgtgcactgaaggagagacaa
ccagaattggatataacccaacgagacatcctctgtgtagaaattgcgggtctttgtcat
gatttgggtcacggaccattttcacacatgtttgatggaagatttattccactcgctcgt
gaaggtttgaagtggaagcacgaaactgcttctgttaaaatgtttgagcacttagtcaca
tccaatggactagaagaagtcatgaagtcatatggtcttgtcctggaagaagatatgatc
ttcatcaaggaacaaataggagggcctatcgatgaaaacatttgtgagaaatcgtggcct
taccatggtcgaccaaaggagaagagtttcctgtatgagatagtagctaacaaaaaaaat
ggcattgatgttgacaaatgggattattttgcaagggattgccatcacctaggaatccag
aataattttgattataggcggttaattaaattcactcgggtctgtgaagtagaaaacgag
aagcatatctgtgcccgtgacaaggaagttggaaatttgtatgatatgttccacacacgg
aattgcctgcatcgacgagcataccagcataagattggcaacatcattgaaataatgatt
acagaagcctttcagaaagcagaccgtttttttgaaatagaaggctctaaaggaaaatcg
taccggatttctacagcaatggaagatatggaagcctacactaagctaactgataatatc
tacctggaaattctgcactcaagccgtccagaactgaacgaggcacgagaaattttgcgt
aaaatagaacggcgtgaattatacaagtttctaggagagactcaacctgaaaaagtaaat
gaaattccaaaggatgaatatgatggcctggcagatgacatcgctaattccaagccggaa
aagaatcctccaaatgtggatctaaaagctgaagacttcatagttgatgttatcagtatg
gattatggaatgaaagatcagaatcccattgataatgttctcttctattgcaaggctgat
ccttccaaggctgtcaagatcagtaaagaacaggtttcaaggcttttacccaggatattt
gcagaacaggttattcgggtttattgcaaaaatctggatccaaatattgtttcagctgca
aaacagtatttcgttcagtggtgtataaagagggatttcaccaaaccacaggatggtgat
gtgattgcccctcatctaactccaatgaaacaaagctggaataacagaagtggggatgaa
ttcaagacaacttcagaaccgagttgcaagcaaaggctttctttcaataagtaa
DBGET
integrated database retrieval system
