Aythya fuligula (tufted duck): 116501801
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Entry
116501801 CDS
T07966
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03013
Nucleocytoplasmic transport
aful03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116501801 (UPF3A)
03015 mRNA surveillance pathway
116501801 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aful03019
]
116501801 (UPF3A)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116501801 (UPF3A)
mRNA cycle factors
P-body specific factors
116501801 (UPF3A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
116501801
NCBI-ProteinID:
XP_032063287
UniProt:
A0A6J3EN20
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Position
1:complement(143671374..143690679)
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AA seq
362 aa
AA seq
DB search
MIILSFALLIPGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEE
KICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRL
REEEKRKRREEERRKRKEAEKQKKISEKEIRIKLLKKPEKGDEQASEKHKEKDEDADIEE
NKWEKSPGSGSIKSKSSEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLEDGRK
HRAHYEFDKFVRRNEEELKWGKGYSQDRGKKGNHTYSFTVEAVDKLGKEDKCDDMASKKE
RIRNKDRPAMQLYQPGARIRTHTGPTSKTYDCSGKSFEDALDKKYEADNSAGGGSEKSEE
AE
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgattattttgagttttgcactgctgatcccaggtctggagtatcctgcagtggttgaa
tttgctccattccagaagatttcaaaaaagaagttaaaaaagaaagatgccaaagccggg
agcattgaagatgatccagaatataggaaatttttagagagttactgtgctgatgaagag
aaaatctgtgccaatcctgagactcttttgggagagattgaggccaaaacaagggaactc
attgctagaagaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcag
agaattcgagaagagaaacgagaggaacgaaggcggagagaactggagaagaaacgtctg
cgggaggaggagaaaaggaagcgcagggaagaggaaagacgtaaaaggaaagaagcagag
aagcaaaagaaaatttccgaaaaagaaataagaatcaagcttcttaagaagccggaaaag
ggagatgagcaggccagtgaaaagcacaaagaaaaagatgaagatgctgacattgaagaa
aacaaatgggagaagtcccctgggtctgggagtataaaatccaaatcatctgagggctca
ctaaaagaacttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatttggag
agaagatttcgagaaaaagaacctgaaagacaaaggtatcgattggaggatggcagaaag
catagagctcactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaatgg
gggaaaggatacagccaagacagaggaaagaaagggaaccacacctacagcttcactgtg
gaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggag
cgcataagaaataaggatcgtccagccatgcagctctaccagccaggagctcgcattcga
acacatacgggacctacaagtaagacctatgactgcagtgggaaatcttttgaagatgct
ctcgacaaaaagtatgaggcagataattcagctggaggtggttctgagaagagtgaggaa
gcagaataa
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