Anopheles funestus (African malaria mosquito): 125764920
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Entry
125764920 CDS
T09273
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
afun
Anopheles funestus (African malaria mosquito)
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125764920
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125764920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
TetR_C_2
Motif
Other DBs
NCBI-GeneID:
125764920
NCBI-ProteinID:
XP_049285596
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Position
2:13080506..13088846
Genome browser
AA seq
1253 aa
AA seq
DB search
MIKRPSKKDSENEILRMQQEFYAEQNRDVNFQPAAKVVRMQRDGENPVNRAAGNVRQSEF
AKRRAQRLQASAVSEPVESMCTEDEPAEEPLEEPSTESLVMGEVVERNPEKIFHEGAATI
EGSFPKTLHITAYPAKPKPNVSKKSIFAQMVSKEKVNSLQPKGSSESQGKIEFEAATEST
LLEGWDATEIHNENMRKLNQMSIEEINKERNHLLNTLDPKLVEFLKARKKPGTSAQKPLP
ENQPRMESKQISNPDLLPVGMEVLKEKGSEQWINFDVLEPEKLEWTKDIERSVKELKPGE
SYEARFDWRGVLQPYVAETNHQQADDRELYLHGEDAQRPGYTLQELFRLARSNVLQQRIS
ALGAIAGMLNIMNQGFYDGVLELPVSKVFFFLRFALDENTPSVVEVASRALASLFYNDTD
EILLDTVFDSEYGMVQPELALNITHSHEEERRQQQQQMEAGFGAMNLTGAVSGGSSRQSR
KAHFKANLPDPNDPDDVHNRETMNDFHLAETDLIECLARTNIIERIRYILFAMKPEGATV
INCTKILIRLARTSEQMALKIATNEALIGGLVKNYLTSIESSDLEHQPQHVVLKLVRILC
GYRNDFYDQHLDLYHVTSLVKRYVFSRKDIDVNMIQIQIEAFRFFRLLLQCKPIDGLHND
LWPALCYLVEWHYQHLIFAEEGPFIIRQHAVALLALIGPGLQQQDADAASCGASALGEKL
FACCSKWFAVAERTGANEFSQKMLLAGCLWTAARAQHVVGMETYKTFQAKYLTPFVRSAR
FGEIIQTLSSSSLLLTHFEDRSEYGIGSLPSLGAVQVRRNQTVPTLIVTRSYPVFLLHAL
LRLMLDEQQYTSLKEDIFGTAAHRHYLQTLCARTRNHRPQSGAVSSLIGNWFVQTIEQRY
LLDVLQLVLVEVGNGREKRATGLEGDLANEEAVRTIGLQVAFFLTYSLSEAFYPALVQLF
DNIVFVPAYYGTVGLDLGVTGADMQRWKLNYKLLAQKALQNEVNHVQDGFTVREWKSPLL
RRSWPYSPLYLMVDKLEKGSPKLELLTESAIISTGLRFAELIEAAGITIASPTERLMYLM
AAFLGPDSKFLEPDLSVLIERRLAALRTLSRHGDNVFDFEGAKIENRKSYYGLYQLALDT
FQSSSYGHSGFGCLLMVPLAQKYDVRWRNMVWSEYVAVLRFITCTEHELFGELAHYLEPA
ESDTVLLRSYGQALNSNLLRPGSIPHRVAHHHLQAYRSKVKVMPDSEKRTTAS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagaccctctaaaaaggatagtgaaaatgagatccttcgtatgcagcaagag
ttctatgcggaacaaaaccgggacgtgaattttcagcccgctgccaaagtggtgcgtatg
cagcgggatggagaaaatccggttaacagagcagccggtaatgtgcgccaatcggaattc
gcgaaacgacgagcacaacgtcttcaagcatcggccgtatctgagccggtcgaaagcatg
tgcacagaagatgaacctgccgaagagccactcgaagagccgtccaccgaatcgttggtt
atgggagaggtcgtagaacgaaacccggaaaagatattccacgaaggtgctgcgacgatt
gaaggttcttttcccaagacgctgcacattacggcgtacccggcaaaaccaaaaccgaac
gtgtcgaagaaaagtattttcgcacaaatggtttcaaaggaaaaagtgaactctttgcaa
ccgaaaggatcgtcagaaagtcagggcaagatcgagtttgaagcggcaactgaaagtacg
ctactggaaggatgggatgcgacggagattcacaatgaaaacatgcgtaaactgaatcaa
atgtcgattgaagagatcaacaaggaacggaaccacctgttgaacactcttgatccaaag
ttggtggagttcctcaaagcgcgtaaaaagcctggaactagtgcacagaagcctttgccc
gagaaccaaccccggatggagagcaaacaaatttcgaatcccgatttactcccagtcggt
atggaagtgttaaaggaaaaaggatcagagcagtggataaatttcgacgtactggaaccg
gaaaagctcgaatggacaaaagatatcgagcgcagtgtgaaagaactcaaacctggcgaa
tcgtatgaagctcgtttcgattggaggggagttttgcagccgtacgttgcagaaactaac
catcagcaagcagacgaccgggaactatatctgcacggtgaggatgctcaacgtcctggg
tacacgctacaggaactgttccgtttggcacgttcgaacgtactacagcagcgtatttct
gcccttggggccatcgctggaatgctaaacatcatgaaccagggtttctacgacggtgta
ctggaacttcccgtttcgaaggtgtttttctttctacgatttgcgcttgatgaaaacaca
ccttccgtggtggaagttgcctcgcgcgcactggccagtctgttttacaacgataccgac
gagatactgcttgataccgtgttcgattcggagtacggtatggtgcaaccggaactagcg
ctaaatatcactcacagccacgaagaagaacggcgacagcagcaacagcaaatggaagca
ggcttcggagccatgaacctaaccggtgcagtttccggtggatcgtcccggcaatcgcgc
aaagcacactttaaagctaacctgcccgatccgaacgatccggatgatgtgcacaatcgt
gaaacgatgaacgatttccatctggcggagacggatctcatcgagtgtttggcacgaacg
aacattatcgaacgcatccggtacattttgttcgcgatgaaaccggaaggggcaaccgtc
attaattgcaccaagatattgattcgattggcacgtaccagtgagcagatggcgctaaag
atagcaaccaacgaggcgcttatcggtggactggtgaaaaactatctcacctcgatcgaa
agcagtgatcttgagcatcaaccacagcacgtcgtgttgaagctggtacgcatcctgtgc
ggatatcgtaacgatttctacgaccagcatctggacctttaccatgtaacgagcctcgtg
aagcgttacgtcttcagtagaaaggatatcgatgtaaacatgattcaaatacaaatcgaa
gcatttcgattctttcgtttgctgttgcaatgcaaacccatcgatggattgcacaacgat
ctatggccggccctgtgctacctggtcgagtggcactatcagcatctcattttcgccgag
gaaggaccatttatcatccgccagcatgctgtcgccttgttagccctaattggacctggc
ctgcagcaacaggatgcagatgcagcttcctgcggtgcaagtgcgcttggcgaaaaattg
ttcgcttgctgctcgaaatggttcgcagtggccgaacgtaccggtgctaacgagttctcc
caaaagatgcttctggcgggatgtctttggacggcagcccgagctcaacacgtggtcggg
atggaaacgtacaagacattccaggcgaaatatcttaccccatttgttcgtagcgcacgg
ttcggtgaaatcatccaaacgttaagctcatcgtccctattgctgacgcactttgaagac
cggtccgagtatgggatcggttccttaccatcgttgggtgctgtacaggtgcgtcgtaac
caaaccgttccgacgctaattgtgacgagaagttatcccgtgtttctgctccatgcactg
ctacgtctaatgctggatgagcaacaatatacgtccttgaaggaagacattttcggcacc
gctgctcatcgccattacttgcagacactgtgcgcacggacacgcaaccaccgtccgcag
agcggcgctgttagtagtttgattggcaattggtttgtccaaacgatcgaacagcgttat
ctactcgacgtgttgcagctggtactggttgaggttggaaatggtcgtgaaaaacgtgcc
actgggctagaaggagatttggccaatgaagaagcggttagaacgattggccttcaagta
gcctttttccttacctattcgcttagtgaagcgttctatcccgcgctcgtgcaactgttt
gataatatcgtttttgtacccgcttactatggaacggttgggttagatttgggcgtaacc
ggtgcggacatgcaacgatggaagcttaactataagctactggcccaaaaagcgttacag
aacgaggtcaatcacgttcaggacggatttacagtgcgggaatggaaaagtccactattg
cgacgcagctggccgtacagtccgctttatctgatggtggataagctggagaaaggttcc
ccaaagcttgaactacttaccgagagcgccatcatcagtaccgggttgcggttcgcggag
ctgatcgaagcggccggcattacaattgccagccctaccgaacggctgatgtacctgatg
gctgccttcctagggccggactcaaagtttctcgaaccggatctatcggtgctgattgaa
cgacgccttgcagcactccgcaccctgtcccggcacggtgacaatgtgtttgattttgaa
ggggcaaaaatcgaaaatcgtaaaagctactacgggctgtatcagttggcgctggatacg
tttcaaagttccagctacggtcacagtgggttcgggtgtcttttgatggtaccgctagca
caaaagtacgatgtccgctggcgcaacatggtgtggtcggagtacgttgccgtgctacga
tttatcacctgcaccgaacatgagctgtttggcgagctggcacactacctggagccggca
gaaagtgataccgtgcttctacgttcttatggccaggcgctcaattcgaatctgctgcga
cccggatcaataccgcatcgggtcgcacatcaccacctacaggcgtaccgttcgaaggtg
aaagtgatgccggattcggaaaaaaggaccacggcaagctaa
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