Anopheles funestus (African malaria mosquito): 125768723
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Entry
125768723 CDS
T09273
Name
(RefSeq) DNA ligase 4-like
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
125768723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afun03400
]
125768723
Enzymes [BR:
afun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
125768723
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
125768723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_IV
BRCT_2
BRCT
Motif
Other DBs
NCBI-GeneID:
125768723
NCBI-ProteinID:
XP_049292762
LinkDB
All DBs
Position
X:complement(12334665..12338082)
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AA seq
920 aa
AA seq
DB search
MSVKQESFSALSSLLETVSHSPTHVKETVLRKFFQDFEHYRQSFEDVGNQPSIYPWLRLI
LPGMDRERKAYGLRERTLAEAYIRALGLDRRNEEVQRLLGAGNDLADRLGPLLHGRCPAV
GDLTVGDVNGRLDAIGEGGRAVAARDELVALIERGSPLDLRWLVRIVLKNLRLGVSNRRI
LQLYHPNAPTLYDGASDLKQMVQLIETKAPDVLETAGGVVVLLTHFIRPMLCQRVELRQV
GELLRRDTYWLETKMDGERFQMHWDGTSFRYYSRNGHDYSDAFGRTPDQVGGTLTPMLAS
LIAPSTRDLILDGEMMVFDRRDLRYRDKCDGTDVKALRPGNANLRPCFCVYDVLYHNGRA
LTSVPYAERARLLPNVVREQFGFVQHCRRERVRDADHLIELINAAIDAQQEGVVLKREDA
PYQPNRRAGTGWYKIKPDYIDGLVVDFDLLVMGGYYNLRRSYVNAFLVGVARSPGVYVSV
AKVTMGLGVAEWQQLNQTLRSHWRTESIEGLHCGRVQPDVWIAPCNSIVLQLKGSELVRS
DSYGAGFTIRFPRIVTTRADKLPDEVCTLEELEQLGTKAGPGSSPQLDTRKATKLAKRHV
TLADLNAPAPEKPSKHGKKRLIAAERLLVPDQRAVSPLPGGMLKGRDVCVMSVDNRTGAP
TIETLERLVQRHGGRAVANPSPDTFAIVAGRVTFKVRKYMEAGRWDVVREDWLLRAGLDG
RLEPFRPEDILTATEPTRMKLTEQYDRYGDSYTRPTTPTTFGALLRRMKRDADQGPVTHQ
LTGSETVHAETVLLGVRQATGKRLFRGLSARLYLNRSDRRSGDAEEDETSLSVDAYRAQR
EMLRFVQHGGHWLRDTEPDAVRYVFVATPVEECAAVEEWIATVTKSDQNDPPKLLRVQWI
GRSIEAGRLYDEKDFTFNDS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaagcaggaatcgttcagcgcgctaagttccttgctggaaacggttagtcat
tcacccacgcacgtgaaggaaacggtgctgcgcaagttttttcaagactttgaacactac
cgtcaatcgtttgaagatgtgggaaatcaaccatcgatctatccgtggttacggttaatt
ttgccgggcatggatcgtgaacgcaaggcgtacggtttgcgggaacgaacactggccgaa
gcgtacattcgggcacttgggctcgatcggcgcaatgaggaggtgcagcggttgctagga
gcggggaatgatttggcggaccggttaggaccgttgctgcacggtcgatgtccggccgtg
ggtgatctgaccgttggtgacgtgaacggtcgcctggatgcaatcggcgaaggtggacgg
gcggtggcggcacgcgatgagctggtggcactgattgaacggggcagcccgctcgatctg
cggtggttggtgcggattgtgttaaaaaatttacggcttggcgtaagcaaccggcgtata
ttgcagctgtaccacccgaatgcaccgacgctgtacgatggtgcgagcgatctgaagcag
atggtgcagctgatcgagacgaaggcaccggatgtgctggagacggcgggtggtgttgtc
gtgctgctgacccactttatccgtccgatgctgtgccagcgagtggagctgcgccaggtc
ggtgagttgctgcgccgtgatacgtactggctcgagacaaagatggacggcgagcggttc
cagatgcactgggatggaacatcgtttcggtactattcgcgcaacgggcacgattacagt
gatgcgttcggtcgaacgcctgaccaggtgggtggtacgctaacgcccatgttagcgtca
ctgatcgcgccatccacccgtgacctcatcctggacggtgagatgatggtgttcgatcga
cgtgaccttcgctatcgggacaagtgtgacggtacggatgtgaaagcgctccgaccgggc
aatgctaatctgcggccgtgcttctgcgtgtatgacgtgctgtatcataatggacgggca
cttaccagcgtaccgtacgcagaacgggcacgcctcctaccgaatgtggtacgggaacag
ttcggctttgtgcagcactgtcgccgggaacgggtacgggatgcggaccatctgatcgag
ctaatcaatgcggccatcgatgcgcagcaggagggtgtcgtgctgaagcgtgaggatgca
ccgtaccaaccgaatcgacgggctggtaccggctggtacaagatcaagcccgactacatc
gacggtttggtggtggactttgatctgctcgtgatgggcggttactacaatctgcgccgg
tcgtacgtgaacgcatttctggtcggtgtcgcccgcagcccgggcgtgtacgtttcggtc
gcgaaggtaacgatgggacttggtgtggccgaatggcaacagctgaatcaaacgctacgg
tcccactggcggacggaatcgatcgagggattgcactgcggccgtgttcagcccgacgtg
tggattgcaccgtgcaactcgatcgtactgcagctgaagggttccgagctggtacggagt
gattcgtatggggctgggttcactatacgctttccgcgtatcgtcaccacgcgtgccgac
aagctgccggacgaggtgtgcacgctggaggagttggaacagcttggcactaaagccggg
cccgggagttcaccccaactggacacccgcaaggcaaccaagcttgccaaacggcacgta
acgctagcggatttaaatgcgccggccccggaaaaaccatcaaaacacggtaaaaagcgt
ttgattgcagcggaacggttattagtaccggaccagcgggccgtatcacctctgcctggt
gggatgttgaagggtcgcgatgtgtgcgtgatgagcgtcgacaatcggacaggtgcaccg
acgatcgaaacactcgaacggttggtgcagcgacacggaggccgtgccgttgctaatccc
agcccggacacgttcgccatcgtagccggccgggtaacgttcaaggtgcgcaagtacatg
gaagcgggccggtgggatgtggtgcgggaagattggttgctccgtgccgggctggacggt
cggttggaaccgttccgaccggaagacatacttaccgcaacggaaccgacccggatgaag
cttaccgagcagtacgaccggtacggtgattcgtacacacgtccaaccacacccaccaca
ttcggagcgttacttcgccgtatgaaacgggatgcggaccaaggcccggtaactcaccag
ctaaccggttcggaaacggtacatgccgaaacggtcctgttgggtgtccggcaagcaacc
ggcaaacgtttatttcggggtcttagcgcgcggctatacctgaaccgaagcgatcggcgt
tccggtgatgcggaggaggacgaaacttcactgagtgttgatgcgtaccgggcacaacgt
gagatgttgcgatttgtacagcacggtggccattggttgcgcgatacagaacccgacgcc
gttcggtatgtgtttgtggcgacaccggttgaggagtgtgctgctgtggaagaatggatc
gctacagttaccaaatcggaccagaacgatccaccgaagctgttgcgtgtgcaatggatc
ggacgctccatcgaagctggacggctgtatgacgagaaggattttacttttaatgactct
taa
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