Anopheles funestus (African malaria mosquito): 125770884
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Entry
125770884 CDS
T09273
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125770884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afun03041
]
125770884
Enzymes [BR:
afun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125770884
Spliceosome [BR:
afun03041
]
Complex A
U2 snRNP components
U2 related factors
125770884
Complex B
125770884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
125770884
NCBI-ProteinID:
XP_049296886
LinkDB
All DBs
Position
3:complement(58586166..58589912)
Genome browser
AA seq
1078 aa
AA seq
DB search
MTRTGENGKDRRRSRSKSNSPERKKKRSRSHDRSKGSSSRSSVNNGSTNAAGLSSVFGGS
SSSSSSSSSARRERHREEHRERERELWEREKERDRELEKEREKEAARKREREKEREKLRE
QATKYAQSVSSSGKQSKFDQMPPGMMAPPPLLPPTVVVVEKLAEEKKSIFRERPKEEVYE
VPVAPIDKEEEQRRLEQEMTKRRERIERWRAERNKKEQEIKKPLPTIVPMSSSGSKKWSL
EDDEEDDETEDAKDKAEEAVEEEEEIDPLDAFMKEVNEEVRKVNKLSNPLPKTDGKASSS
GVTIITGVAKQKSETKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHS
GINYMPFRKSFYVEVPEIARMTQTEIDAYKKELEGIAVKGKGCPKPIKTWAHCGVSKKEF
EVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPLDDGD
GPIAIIMTPTRELCMQIGKDIKKFSKSLNLRTACVYGGTGISEQIAELKRGAEIIVCTPG
RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP
RQMEALARRILKKPIEVQVGGRSVVCKDVEQHVVVLDDEAKFFKLLELLGIYQEQGSIIV
FVDKQENADSLLKDLMKASYPCMSLHGGIDQFDRDSTMVDFKQGRVKLLIATSVAARGLD
VKQLILVVNYDCPNHYEDYVHRCGRTGRAGAKGFAWTFLTPEQGRYAGDIIRALELSGGT
VPDDLRNLWDTYKAAQEAEGKKVHTGGGFSGKGFKFDAQEAAAVNERKKMQKAALGLQDS
DDEEDLEQDIDQQIENMFATKRIVKEVEVPSTNNREQQNNPPPVPTPPVPNVTHSDKLEL
AKRLASKINLQKTLGTDSKGATQQAAEAILKGANTQQLIAAKTVAEQLAAKLNNKLNYQP
KDEEEPVVETNEQVFRKYEEELEINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVP
PGKNPPDGERKLYLAIESCNELAVTKAKREITRLIKEELLKLQASSHHVINKARYKVV
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacaggtgaaaatgggaaggatcgacgtcgatcaagaagtaaatcaaattcg
ccggaacgcaaaaagaaacgttctcggagtcacgatcgaagcaaaggcagcagttcccgt
tcatccgtcaataatggcagtaccaatgcagccggtttgtcatctgttttcggtggcagt
agcagcagcagcagcagcagtagttccgctcgtcgagaacgccaccgggaggagcatcgg
gaacgggaacgagagctctgggagcgggagaaggaacgcgaccgggagctggaaaaggaa
cgcgaaaaggaagcagcccgtaaacgggaacgtgagaaggagcgggaaaaactacgagaa
caggcaactaagtatgcacaaagcgtaagcagcagtggaaaacagtccaagtttgatcag
atgcctccgggcatgatggctcccccgcctcttctaccacccactgtggtggtcgtggaa
aagttggctgaagaaaagaagtcaatattccgagagcgtcccaaagaagaggtatacgag
gttccggtagcacccatcgacaaggaggaagaacagcgtcgccttgagcaggaaatgacc
aaacgtcgagagcgtatcgagcgctggcgggcggaacgtaataagaaggaacaggaaatc
aagaaaccactgccaacgattgttccgatgtcatcgtccggctcaaaaaagtggagcctc
gaggacgacgaggaagatgacgaaacggaagacgcgaaggataaagcggaagaggcggtc
gaagaggaagaagaaatcgatccgttagatgcctttatgaaggaagtgaatgaggaggta
cgtaaggtaaacaagctgtcgaatccactcccgaaaacggatggcaaagcatccagcagt
ggtgttacgatcatcaccggagtggcaaagcaaaaatccgaaacgaaaaaaggcgaactg
atcgagcagaaccaggacgggttggagtattcgtcggaggaagaacaggaagacataaag
gacacggcagcgaatcttgctaacaagcagaagaaagagctggctaaaattgaccattcc
ggcattaactatatgcctttccggaagtcgttctacgtggaggtgccggaaatcgctcgc
atgactcagacagagattgacgcatataagaaggagctggaaggtatcgccgtcaagggc
aaaggatgcccgaaaccgatcaaaacctgggcccactgtggcgtgtcgaagaaggagttt
gaggtgctccgcaaacttggctttgagaaaccgacaccgatccaatgtcaggcaataccg
gccatcatgtcgggaagggatctgatcggcatcgcaaaaactggcagcggcaaaacgctg
gccttcattttgccaatgttccgacacattctcgatcagcctccgctggatgatggtgat
ggaccgatcgcgatcataatgacgcccacgcgcgagctttgcatgcagatcgggaaggat
attaagaagttttcgaaatcgttgaaccttcggacggcttgcgtttacggtggaacggga
atatcggaacagattgccgagctaaaacgaggcgcagaaattattgtctgtacgcccgga
cgtatgatcgacatgctggcggcaaactcgggtcgtgtgacaaatcttcggcgtgtaacg
tacgtcgttctggacgaagccgatcgtatgttcgatatggggttcgaaccgcaggtaatg
cgcatcattgataatgtacgtcccgatcgacaaaccgttatgtttagtgcaacattcccg
cggcagatggaggcactggcacgaaggattctaaagaaaccgatcgaggtgcaggtcggt
ggacggtcggtagtttgtaaagatgttgaacagcacgtggtcgtgctggatgatgaggca
aaatttttcaaactactcgaactgcttggtatttaccaggagcagggtagtattatcgtg
tttgtcgataagcaagaaaatgctgacagtctgttgaaagatctgatgaaggcgtcctat
ccgtgcatgagtctacacggtggcatcgatcagttcgatcgagactccaccatggtggac
ttcaagcagggccgggtaaagttattgattgccacctcggttgcagctcgcggtttagat
gtgaagcaactgattctcgtcgtaaactatgactgtccgaaccattatgaagattatgtg
catcgttgtggaaggacagggcgtgctggagcgaagggatttgcatggacattcctcacg
ccggaacagggacgctatgccggtgacattattcgtgcactggaactgtccggtggtact
gtacccgatgatttgcgcaacctctgggacacatataaagcggcacaggaagcggaaggc
aagaaggttcacactggtggtggattcagtggtaaaggcttcaaattcgacgcgcaagag
gcagctgccgtaaatgagcgcaagaaaatgcaaaaggcggctcttggattgcaagattct
gacgacgaggaagatctcgaacaggacattgatcagcagatcgaaaacatgttcgctacg
aagcgtattgttaaggaggtggaagtaccatcgacgaataaccgcgagcaacagaataat
ccaccaccggtaccgactccaccggtaccgaatgtgacacactccgataagctcgaatta
gccaagcggttggcatcgaagataaaccttcagaagacactcggcaccgattcgaaggga
gctacacagcaggcagccgaagcaatactaaagggtgccaatacgcagcaattgattgct
gcaaagacagtcgcagaacaattggcggctaagcttaacaacaagctgaattatcaaccg
aaagatgaggaagaacctgtggtggaaacaaacgagcaggtgttccgtaagtatgaggaa
gagctggagattaatgatttcccgcagcaggctcgttggaaggttacatcaaaggaagct
ctagcgcaaatatccgaatactccgaggcaggtctcacggtgcgtggtacatacgtgcca
cctggtaagaatccacccgacggtgagcgtaaactgtatcttgctatcgaaagctgcaac
gagctcgcagtgacgaaggcaaagcgtgaaattacgcgccttattaaggaagagttgttg
aaactacaggcatcgtctcatcacgtcatcaataaggctcgatacaaggtggtgtaa
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