Anopheles funestus (African malaria mosquito): 125770896
Help
Entry
125770896 CDS
T09273
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03022
Basal transcription factors
afun03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125770896
09124 Replication and repair
03420 Nucleotide excision repair
125770896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125770896
03400 DNA repair and recombination proteins [BR:
afun03400
]
125770896
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125770896
DNA repair and recombination proteins [BR:
afun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125770896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
125770896
NCBI-ProteinID:
XP_049296916
LinkDB
All DBs
Position
3:complement(61068585..61070464)
Genome browser
AA seq
497 aa
AA seq
DB search
MSEVKGSQSNSGTSKGTSSSLITKPANLECKDLEEYLKSRPPEVLEKLYNYPAICLAVYR
ELPEIARQFVIRILFVEQPIPQAVVSSWASQVYAKENTSVSQVLTELGVWRSAAYPGGLA
AWELCPTFKKNLKIALLGGGRPWSMSNALDPDQKSRDIDFLDTYAMSRWRCVLHYMVGAG
SSKGMEGEGISPDAVRILLHANLMKRDETDGSPVITRQGFQFLLLDTQAQVWHFMLQYLD
TCEARGLNLPECLSMLFQLSFSTLGRDYSSEGLSTGLLTFLQHLREFGLVYQRKRKEGRF
YPTRLAHNITSKNASHATTLAQDQESNATKDKGYIIVETNYRVYAYTDSNLQVALLGLFT
ELLYRFPNLVVGVLTRDSVRQAFRGGITAEQIISYLEQHAHPTMLTVEQTINSKSSLPPT
VVDQIKLWENERNRFTYTEGVVYNQFLSQADFITLRDYAQSIGVMIWQNERIRTMVVTKN
GHDDVKKFWKRYSKGGS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggtaaaaggtagccaaagcaacagcggtaccagcaagggtacatcgtcgtcg
ctcatcactaaaccggctaatttggaatgcaaagatttggaagagtatcttaaatcgcga
cctccggaggtcctcgaaaagctgtacaactatccggctatttgtcttgcagtgtatcga
gaacttccggagatagcgcgtcagttcgttataagaattctgttcgtcgagcaaccgatt
ccacaagcggtcgtttcatcgtgggcatcacaagtgtacgcgaaggaaaacacatccgtc
tcgcaggtgctaacggaacttggtgtatggcgcagtgcagcctatccgggcgggctggcc
gcttgggaactatgtccgacgttcaaaaagaacctgaaaatcgcactactcggtggcggc
cggccatggtcgatgtcgaacgcgctagacccggaccagaaatcgcgcgacatcgacttc
ctggacacgtacgccatgtcccggtggcgttgcgtgctgcactatatggttggtgccggt
agctccaaagggatggaaggtgaaggcatttcacctgatgccgtgcgcattctgttgcac
gccaatctcatgaaacgagacgaaaccgacggtagtccggtgattacgaggcaaggcttc
cagttcttgctgctcgacacacaagcgcaagtgtggcattttatgctgcaatatctcgac
acgtgtgaagcacgtggccttaatttgccggagtgtctttcgatgctgtttcagctcagt
ttcagcacactggggcgagattacagctccgaagggctcagtacggggttgctcactttc
ctgcaacatctgcgcgagtttggactcgtctaccaacggaagcgcaaagaaggtcgcttc
tatccgacacgcttggcgcacaatattacctcgaaaaatgcatcccatgcgacaacgctg
gcccaggatcaggaatcaaatgccaccaaggataagggctacatcatcgtcgaaacgaac
tatcgcgtgtatgcgtacaccgattccaatctacaggttgccctgctcggactgttcacc
gaactgctgtatcgcttcccgaatcttgtggtcggtgtgctaacgcgcgattccgtaagg
caagcgttccgtggtggcattactgcggagcagatcattagctacctcgaacagcacgct
catccaacgatgctgaccgtcgagcagacgatcaacagcaaatcctccctcccgccaacc
gtagtcgatcaaattaagctgtgggaaaacgaacggaaccgtttcacctataccgagggc
gtcgtctacaatcagttcctatcgcaggccgattttataacgcttcgcgattacgcacaa
tccatcggcgtgatgatatggcagaacgagcgcatacgtacgatggtcgtgacgaagaac
gggcatgatgatgtgaaaaagttttggaaacgctactccaagggtggtagctag
DBGET
integrated database retrieval system
