Aspergillus flavus: AFLA_002303
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Entry
AFLA_002303 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
afv
Aspergillus flavus
Pathway
afv03013
Nucleocytoplasmic transport
afv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AFLA_002303
03015 mRNA surveillance pathway
AFLA_002303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_002303
Enzymes [BR:
afv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AFLA_002303
5.6.2.5 RNA 5'-3' helicase
AFLA_002303
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AFLA_002303
mRNA cycle factors
Common to processing body (P body) and stress granule
AFLA_002303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
UvrD-helicase
Helicase_RecD
PIF1
SLFN-g3_helicase
nSTAND3
AAA_22
AAA_16
ATPase
AAA_10
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
KAF7625441
LinkDB
All DBs
AA seq
1072 aa
AA seq
DB search
MAALGDDSRELDDITGGLRPRRHDDDDDGSDNGDDDLESTTSAPAAENAENQRHTEEEKE
LPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLG
DTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRS
FLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAVDDEPAPVLLRY
DDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVK
LAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTAD
YVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELN
GSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCE
RIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELLKLNQLKAELGELSSQDE
KRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVL
GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFP
SNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSNLGNEEISASGTSYLNRTEATN
VEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGR
EKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHF
KERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHASSVTSGMMNGKNGHRNDFH
DTGSVVGYIPDDVSSVHSSALGGVGIPSGYPPMFQNFADSWPALPGNRRANGNRGKGAPS
IAGESIAATESDVTASIIDGKSVDQGGVSLAGLSIHDMSKQPSLSQSDRLKRYVESGGRE
PYKPGVADNNSIFGGSSASIRVTRGVPGHIIDDDDTRSVSTAFASQVGGNYD
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctaggcgatgattcaagggaattggatgacataactggtggtctccgcccg
cggaggcatgacgatgatgatgacggctcggataatggggatgacgacctagaaagtaca
actagtgctccggctgctgagaatgcagaaaatcaaagacacacggaggaggaaaaggag
cttccgccacatgcatgcgcatattgcggcattcataatccgagcagtgttgtgaaatgt
ctctcatgcagcaaatggttttgcagtgctcgtggaaatacgtcgtcctctcacattgtc
aaccacctcgttcgagcacgacacaaggaagtgcaattacaccctgcctcgtctctcgga
gatacaattctggagtgctataattgcggaactaagaatgtctttcttcttgggttcatt
ccagcgaagtccgatacggtcgtcgtattactatgccgccaaccttgtgccgccatgcca
tcgtccaaggacatgaactgggatacttcccgctggcagccactcatagaagatcgttca
tttctgccatggctagtagctgcgccgtctgaccaagagcaactgcgagctcgccacctc
agccctcagcttattgcgaaattggaggaaatgtggaaagaaaactcccaagccacgttt
tcagatctcgagaaggccaccgctgtagatgacgaacctgctcccgttcttttacgttat
gatgatgctttccagtatcaaaacatctttggaccactcgtcaagattgaagcggattac
gatcgaaaattgaaggagtcgcagtcgcaggatgggttgattgtgcgttgggaccttggt
cttaacaacaaacatctggctagcttcattctcccaaagcttgagcttggagacgtcaaa
ttggctgtgggagacgaaatgcgactgaaatacactggtgaactgcggcccaagtgggaa
ggggttggatacgtcatcaagatcccgaacaaccagtctgacgaggttactattgagttg
cgagcaaagggagatcataagtcggtgcctacagaatgtacacacaatttcactgccgac
tatgtatggaagtccacctcctttgatcgtatgcaactcgccatgaagacattcgcagtt
gatgagatgagcgtttccggctacattttccatcggcttctgggtcacgaggtcgccgct
gcaccaatgaagacacaaatgcccaagaagttcagtgtccctggacttccagaactaaat
ggtagccagattaatgcagtcaagagtgtgctacagaggcctctgagtctcattcaggga
cctcccggaaccggaaagactgtcacctccgctaccatcatttatcatcttgccaaactt
aatggaggtcaggtcctagtctgcgctccttccaacgtcgctgttgatcaactctgcgag
cgtatccacagaacaggtttgaagacagtgcgtgtaaccgccaaatctcgcgaagatgtg
gaatctcccgttggcttcttgtccctgcatgagcaagttcgcctaaatgacagcaatatt
gaactcctgaagcttaaccagcttaaggcggaactcggggagttgtcaagtcaagacgaa
aagcgactgaaacagctcacgcgttcagcggagcgcgagattctgaacaacgctgacgtt
atctgctgcacttgcgtcggtgccggtgaccctcgtctcgcgaaactcaagttccgcact
gtattaattgacgaatctactcaatcagccgaaccggagtgtatgattccgttggttcta
ggatgcaagcaggttgttctggttggtgatcatcagcaacttggacccgtcattatgaac
aagaaagcagccaaagcaggcctcaatcagtcgctttttgagcgacttgttatattgggt
tgctctcctatccgcttgaacgtgcagtatcgtatgcatccctgtctttcagaattccca
tcgaacatgttctacgagggctctctgcagaacggtatctcttctattgagcgtcttcgt
cgtgatgttgacttcccctggcccatcagcgataatcctatgatgttctggtcgaacctt
ggcaatgaggagatctccgcctctggaacttcttatctcaatcgtaccgaagccacaaat
gtggagaaaattgtgacccgtttcttcaaggctggtgtacagcctggagacattggtatc
attaccccttatgaaggccagcgtagctacattgttagctccatgcaggcaaccggtacc
tttaagaaggagcactacaaggaaatcgaagttgcctccgttgatgctttccagggacga
gagaaggacttcatcatcctctcttgtgtgcgttccaacgaccaccaaggcatcggtttc
ttgagcgatccgcgtcgtctcaatgttgcgcttacacgagcaaagtatggtctagcgatc
cttggtaatccgaaggtgctatctaagcatcccttgtggaactgcctgttgcagcacttc
aaagaacggcattgtctggtcgaggggcctctgtctaatcttcaggaatccctgatccag
tttagccggcctaaacaggcatatagagggccccagcgattccagatggcgtataaccac
gcctctagtgtgaccagtggaatgatgaatggaaaaaatgggcaccgcaacgacttccac
gacaccggatccgtggtaggctatattcctgatgatgtctcctctgtccattcttctgct
cttggcggtgtcggtattccttcaggatatcctcctatgttccagaacttcgcagactct
tggcctgccctcccaggaaaccgtcgggccaatggtaacagaggaaagggggcgcctagc
attgctggcgaatccattgcagcgacagaatctgacgttactgcaagcatcattgatggc
aagagtgttgatcagggcggcgtgagtctcgctggacttagtatccacgatatgagcaaa
cagcccagtctcagtcagtccgaccggctgaaacgctatgtcgaatccggtggtcgcgag
ccttacaagcctggtgttgctgataataacagcatctttggtggaagctctgccagcatt
cgtgtgactcgtggtgtaccaggccacatcattgatgacgacgacacacgcagcgtttct
actgcgtttgcgagccaggtagggggaaactacgattga
DBGET
integrated database retrieval system