Aspergillus flavus: AFLA_012967
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Entry
AFLA_012967 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
afv
Aspergillus flavus
Pathway
afv03013
Nucleocytoplasmic transport
afv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFLA_012967
09122 Translation
03013 Nucleocytoplasmic transport
AFLA_012967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afv03019
]
AFLA_012967
03041 Spliceosome [BR:
afv03041
]
AFLA_012967
Messenger RNA biogenesis [BR:
afv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AFLA_012967
Spliceosome [BR:
afv03041
]
Complex C
Other components
EJC/TREX
AFLA_012967
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AFLA_012967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-ProteinID:
KAF7627027
LinkDB
All DBs
AA seq
670 aa
AA seq
DB search
MADEDVESIHVYRRLVDNLLTRAELVKLDKQIEPPLTETHLGEAIWKVEGDDEQVASRLS
QQTQFAAVEIAFRERFYSLLATTSIDEPSFIQIWNLLDIISIFSDNEQCEPGLIFWLIEE
LLDSQTIDGCRKVFDYLESRRERNTKKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSAVNLRGEYHTENVTTFDEIPELDTSVSDEADVVMSDEQGPPTTTEGQ
QENNDTEAPSIADPQAPVQDQPAAPKVIISQEEGVDEKANDLNKLYPTFWGLQAYFSAPT
RIFDPQHFATFRTGLEATLSAFKSVNTDLESSGTSKTSEELRKSNKRKRTSDGQEIASSF
NPKYLTSRDLFDLEVNDTAFRRHVLVQALILLDFMLSLTPKAKAKLAELTNKSVLYGFVL
NEDDAKWAVKMRKAIEEYLQEGVGGKFYYRMVDTVLSRDKNWVRWKAEGCPLIERPPVSV
SDYLGAREHATKVYANKRLRSSPMGSLNLNFLSEGESLAGLERLKEPQRFAVPSSDSFMM
GIMDDELDMDTAQTKEDKENATRAKASKTWRVLRLSAKSKLAAFDKIEDGKNLKLLFEAP
QPSEGTPQVLEGTPQAHETMTKASTEGESGGSGHDHGSNSSEQGNVTVATEKGSADSKDA
AAAAATTTDT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaagatgttgaatcgatacacgtctataggagattagttgataatcttctt
actcgagccgagctagtcaaactggataagcaaatcgaacctccgttgacagaaacacac
ctaggagaagcgatctggaaagtcgaaggcgatgatgagcaggttgcgagccggcttagt
caacagacgcaatttgctgcagttgagattgcatttagggagaggttttacagtctgctt
gccactacatccattgatgaaccgtcctttatacaaatatggaatctactcgacataata
tcaatcttttcggataatgaacagtgtgagcccggtcttatattttggctgattgaggaa
ttacttgatagccaaactattgatggctgtcgcaaagtttttgactatctcgagtctcga
agagaacgaaataccaaaaaacactttaagcagaaaagtttaatcattttgagatcctgc
aacgagttgctgcggaggctttcgcgagccgaagatactgtattttgtggacgtgtcttt
atcttcctcttccagagttttccgctaggagacaagagcgccgtcaaccttcggggcgaa
tatcataccgagaatgtcactactttcgacgaaatccctgaactcgacaccagtgtgtca
gatgaggcggatgtggtaatgtctgacgagcagggaccgccaacgactactgaaggccag
caagaaaacaacgatactgaagcgccgtctatcgcggatcctcaggcccctgttcaagat
caaccggcagccccgaaagtcatcatttcgcaagaggaaggtgttgatgagaaggcaaac
gacttgaacaagctctaccctacgttctggggcctccaggcatatttctctgctccaaca
aggatatttgacccccaacacttcgccacattcaggacgggacttgaggccactctttct
gccttcaaatcagttaacacagatcttgaaagttcaggcacgagcaagacgtccgaagag
cttcgaaaatccaacaaacggaagagaacttcagacggccaggaaattgcaagcagtttc
aacccgaagtatctgacaagcagggatttgtttgaccttgaggtcaatgacacagcgttt
cggaggcatgttctggttcaggcgcttattcttttggatttcatgctctcacttactcct
aaggccaaagcaaagctagccgaattgactaacaaatctgtactctacggttttgtgttg
aatgaggacgatgctaaatgggcagtcaagatgagaaaggcgatagaagagtatctgcag
gaaggcgtcggcggaaaattctactatcgaatggtggacactgttttgtcgagggacaaa
aattgggttcgttggaaagccgaaggctgtcccctgattgagagacctcctgtttctgta
tcggactacctcggtgctcgtgagcatgcaactaaagtctacgccaacaagcgccttcgg
tcttcacctatgggctcgctaaatttgaacttcctctccgaaggcgaatcactggccggt
cttgagaggcttaaggaacctcaaaggttcgcggtaccttcctctgattcgtttatgatg
ggcataatggacgatgagttagatatggatactgcccagacgaaggaggataaagagaac
gccacacgcgctaaagcgagcaagacttggcgtgtattaagactttcggctaaaagcaag
ctcgcggcgttcgacaagattgaggatggcaaaaatctaaagctgctttttgaggcccca
cagccttccgaaggcactccccaagttcttgaaggcacccctcaggcccatgagacgatg
acgaaagcctcaaccgagggcgagtctggtggttcggggcatgatcatgggtctaatagc
tccgaacaaggaaatgtcactgttgccaccgagaaaggttcagcggactcgaaggacgca
gcagcagcagcagcaacaacaacagacacatga
DBGET
integrated database retrieval system
