Anaeromyxobacter sp. Fw109-5: Anae109_3440
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Entry
Anae109_3440 CDS
T00559
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw03420
Nucleotide excision repair
afw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Anae109_3440
03430 Mismatch repair
Anae109_3440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afw03400
]
Anae109_3440
Enzymes [BR:
afw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Anae109_3440
DNA repair and recombination proteins [BR:
afw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Anae109_3440
MMR (mismatch excision repair)
Other MMR factors
Anae109_3440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DUF6117
Motif
Other DBs
NCBI-ProteinID:
ABS27624
UniProt:
A7HFX8
LinkDB
All DBs
Position
complement(4039550..4041598)
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AA seq
682 aa
AA seq
DB search
MRVSQRAAPMLDLSTLNPPQREAVTTTEGPLLVLAGAGSGKTRVIAHRVAYLLLQGVEPE
QILAVTFTNKAAGEMRERVAALAGPPGVDVFVSTFHSFGLWLLKEEHKAAGLPKRFAICD
AGDQAALVKRCMREVKVDDRAFDAQRVLALVSRAKNAGKKRIVPGAEGQGDDYDLVASEV
YPRYEQALRAQRSVDFDDLIAKPVELLARDAEVRRRLQRRFRYLLVDEYQDTNVAQLELL
KHLAGERRNVCAVGDDDQAIYGWRGAEVRNILRFERHFPGAREIRLEQNYRSTGRILDCA
NAVIAKNAERKPKRLFTAAGPGEPVRVLALAQEEDEARFVAEELSRLRQEGRPWSHFAIL
FRLNAQSRPIEEALREASMPYVMHGGPAFFDRAEVRDLLAYLKVCVSPHDEVSLARIVNV
PARGIGDASLERVHAWAVARGVHLFDALGRAAEIPELPKGAPERMAAFVALIERYRARFG
EGRVAEAARALVAEVDLYGHARASVQSFEAGQRKVDALDGILRSLEGYEQRTARPSIATW
LQRLALDSRSEEDPAKDDGITLMTLHAAKGLEFPVVFLVGVEEDLLPCAGIQGEARDLDE
ERRLAYVGITRARERLYLTRAATRTKRGKLLPRTPSRFLGDLPPDAHEQVDPDALSSSPA
QVAAQTESVMAALRARLGGGKA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgtcacaacgcgcggctccgatgctggacctctcgacgctcaacccaccgcag
cgcgaggcagtgaccaccacggaggggccgctcctcgtcctcgcgggcgccggctcgggc
aagacgcgcgtcatcgcgcaccgggtggcctacctgctgctgcagggggtcgagccggag
cagatcctcgccgtcacgttcacgaacaaggccgcgggcgagatgcgcgagcgcgtcgcg
gcgctcgccggcccccccggcgtggacgtgttcgtctcgacgttccactccttcgggctg
tggctcctcaaggaggagcacaaggccgcgggcctcccgaagcgcttcgcgatctgcgac
gcgggcgaccaggcggcgctcgtgaagcgctgcatgcgcgaggtgaaggtggacgaccgc
gccttcgacgcgcagcgcgtcctcgccctcgtctctcgcgcgaagaacgcgggcaagaag
cgcatcgtcccgggcgccgaggggcagggggacgactacgacctcgtcgcgagcgaggtc
tacccgcgctacgagcaggcgctccgggcgcagcgctcggtggacttcgacgacctcatc
gcgaagcccgtcgagctgctcgcccgcgacgccgaggtgcgccggcggctccagcgccgg
ttccgctacctgctcgtggacgagtaccaggacacgaacgtcgcgcagctcgagctcctg
aagcacctcgccggcgagcggcgaaacgtgtgcgcggtgggcgacgacgaccaggcgatc
tacggctggcgcggcgccgaggtgcgcaacatcctccgcttcgagcgccacttcccgggc
gcgagggagatccggctcgagcagaactaccgctccacggggcggatcctcgactgcgcc
aacgcggtcatcgcgaagaacgccgagcgcaagccgaagcggctcttcaccgccgcgggt
ccgggcgagccggtgcgcgtcctcgcgctggcgcaggaggaggacgaggcgcgcttcgtc
gccgaggagctctcgcgcctccgccaggagggccggccctggagccacttcgccatcctg
ttccgcctgaacgcgcagtcgcgccccatcgaggaggcgctgcgcgaggcgtccatgccg
tacgtcatgcacggcgggcccgcgttcttcgaccgcgccgaggtgcgcgacctcctcgcg
tacctgaaggtctgcgtctccccgcacgacgaggtgtcgctcgcccgcatcgtgaacgtg
ccggcgcggggcatcggggacgcgtcgctcgagcgggtgcacgcgtgggcggtggcgcgg
ggcgtccacctgttcgacgcgctgggccgcgccgcggagatccccgagctgcccaaaggc
gcgcccgagcggatggcggccttcgtcgcgctcatcgagaggtaccgggcgcgcttcggg
gaggggcgggtggcggaggcggcgcgcgcgctcgtcgccgaggtggacctgtacgggcac
gcccgcgcgagcgtgcagtcgttcgaggccgggcagcgcaaggtggacgcgctcgacggg
atcctccgctcgctcgagggctacgagcagcgcacggcgcggccgtcgatcgcgacgtgg
ctgcagcggctcgcgctcgactcgcgctcggaggaggaccccgcgaaggacgacggcatc
acgctcatgaccctgcacgccgcgaaggggctcgagttcccggtcgtcttcctcgtgggg
gtggaggaggacctgctcccctgcgccggcatccagggggaggcgcgcgatctcgacgag
gagcgccggctcgcctacgtcggcatcacccgcgcgcgagagcggctctacctcacccgc
gcggcgacgcggacgaagcgcgggaagctcctgccgcgcacgccgtcgcgcttcctcggc
gacctgcccccggacgcgcacgagcaggtggatcccgacgcgctgtcgtcctcgccggcg
caggtcgcggcgcagaccgagagcgtcatggcggcgctgcgggccaggctcggcggcggg
aaggcctag
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