Antechinus flavipes (yellow-footed antechinus): 127551301
Help
Entry
127551301 CDS
T08818
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz04659
Th17 cell differentiation
afz04710
Circadian rhythm
afz05017
Spinocerebellar ataxia
afz05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
127551301
09159 Environmental adaptation
04710 Circadian rhythm
127551301
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
127551301
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127551301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127551301
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afz03310
]
127551301
Transcription factors [BR:
afz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127551301
Nuclear receptors [BR:
afz03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127551301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
HisG
Motif
Other DBs
NCBI-GeneID:
127551301
NCBI-ProteinID:
XP_051836891
LinkDB
All DBs
Position
2:546823793..546921907
Genome browser
AA seq
468 aa
AA seq
DB search
MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYNITTNGLTELHEDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAVKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPEVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgattgcagcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattatggtgtcattacatgtgaaggctgcaagggc
tttttcaggaggagtcagcaaagtaatgccacatactcctgtcctcgtcagaagaattgt
ttgattgatcgaactagtagaaaccgctgccaacactgtcgattacagaaatgccttgct
gtagggatgtctcgagatgctgtaaaatttggccggatgtcaaaaaagcagagggacagc
ttatacgccgaggtacagaaacaccggatgcagcagcagcagcgagatcaccagcagcag
cctggcgaggcagagcccctgacccctacctataatatcaccaccaacgggctaacggag
ctccatgaggacctcagtaattacattgacggtcatacccctgaaggtagcaaagcagac
tctgcagttagcagcttctacttagacatacagccttctccagatcagtcggggcttgat
attaatggaatcaaaccagaaccaatatgtgactacacaccagcatcgggtttcttccct
tattgctctttcacaaatggagagacttctccgactgtatccatggcagaattagaacac
cttgcacagaatatttccaagtcacatatggaaacttgccaatacttgagagaggagctc
cagcagataacatggcagacctttctccaagaagagattgaaaattatcagaacaagcag
agggaagtaatgtggcagttgtgcgcggtcaaaataacagaagctattcagtatgtagtg
gagtttgccaaacgcattgatggatttatggaactgtgtcaaaacgatcaaattgtgctt
ttaaaagcaggttctttggaagtggtgtttatcagaatgtgccgtgcctttgattctcag
aacaacaccgtatattttgatgggaaatatgctagccctgaagtattcaaatccttaggt
tgtgaagactttattagctttgtttttgaatttggaaaaagtttatgttctatgcacctg
actgaagatgagattgcattgttttctgcatttgtgttaatgtctgcagatcgctcgtgg
ctgcaggagaaggtaaaaatagaaaaattacagcagaaaattcaactagcacttcagcat
gtcctacagaagaatcatcgggaagatggaatattaaccaagttaatatgcaaggtgtct
acattaagagcactatgtggacgacatacagaaaagcttatggcatttaaagcaatatac
ccagacattgtacgacttcattttcctccgttatacaaggagttgttcacttcagaattt
gagccagcaatgcaaattgatgggtaa
DBGET
integrated database retrieval system
