Antechinus flavipes (yellow-footed antechinus): 127558821
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Entry
127558821 CDS
T08818
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127558821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afz03019
]
127558821
03032 DNA replication proteins [BR:
afz03032
]
127558821
Messenger RNA biogenesis [BR:
afz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127558821
mRNA cycle factors
Common to processing body (P body) and stress granule
127558821
DNA replication proteins [BR:
afz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
127558821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
DUF5697
DUF5539
Motif
Other DBs
NCBI-GeneID:
127558821
NCBI-ProteinID:
XP_051848108
LinkDB
All DBs
Position
4:26224431..26404234
Genome browser
AA seq
1415 aa
AA seq
DB search
MALLAAVRELVSMSGLEECERNCFLFSPTGENMKELKEPRQRKDNRRPDLEIYKPGLSRL
RNKTKIKEPSGTEEFRDETANDRDTSALENGTQAIRDLCKGVDSQQQNGPADTERKEPFQ
GQESCPKASGPEDRSLRIIKRTKKPDLQIYQPGRRLQTVAKDLPGRVEENEVLSQVEQLR
VEDDEPERDLGKDGVKAKPSRDEAEKHLKTLKGGDKGKKTERGEGTRKVHDDMPQGKPGS
AKRYSRSDKRRNRYRTCSTSSAGSNNSAEGTGLPDSGGRRRRQDRAKERPRLKKQVSMSS
TDSLDEDRTDEPDLLGPRRSSERRKPSDRSWSCHGEGERRSEGKENRGGLRVTFDAEIVN
KDVSMVRLTKEDVDRLKADRSSGSMGKAPEKQESKTPNQELRGRGRGILILPAHTALSVN
TTGSPESTLLGSKLLFGAGGKGSRNRGRGGTSRRLWDPNNPDQKPALKSQTSQLHFLDTD
DEVSPTSWGDSRQAQTPYYKFQNSDNPYYYPRTPGPGPQYPYTGYGPLQYPLGPTNGVYP
GAYYPGYPAPSGQYVCGPLPASSLSPEEMEQQVRDLQQQELHRLLRVADNQELQLSNLLS
RDRISPEGLEKMAQLRAELVQLYERCLLLDIEFSDHQNVDQILWKSAFYQVIEKFRQLLK
DPNAENPEQIRSRLLELLDEGTGFFDSLLQKLQVTYQFKLEDYMDGLAIRSKPLRKMVKY
ALISAQRCMICQGDISRYREQANDTTNYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTR
RKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQLELSPNRWRKGRRSTF
RHIGDDTTRLEIWIHPSHSRSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLF
TRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECR
SVIQEQATALGLAMFSLLVRRCTYLLKESAKAHPSSHEDEADQDDIKVSAFLPDLKELLP
SVKVWSDWMLGYPDTWNPPPTSLDLPTQVAMDVWATLADFCNILTAVNQSEVPLYKDPDD
DLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEP
LLAFKGGKYVSVAPVPDTMGKEMGSQQGKQLQDQEDDVVIEDFEEDSEAEGSGGEYDIKE
LRARKLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEIRPLFLVPDTNGFIDHLASLAR
LLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDSC
LRALTSRGNELESIAFRSEDITGQQGNNDDLILSCCLHYCKDKAKDFMPPNKDEPIRLLR
EVVLLTDDRNLRVKALTRNVPVRDISAFLKWAQVG
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctggctgctgtcagggagttggtgagcatgagtggacttgaagaatgtgag
aggaactgcttcctgttttccccaacaggagaaaacatgaaggagttgaaggagcctagg
cagcggaaagataataggcgcccagatctggaaatctataagcctgggctttcccgactg
aggaacaaaaccaaaatcaaggaaccttcaggaacggaggaattcagagatgaaactgcc
aatgacagagatacctctgctctggaaaatggaacccaggccattcgagatctctgcaag
ggggtggacagccaacagcaaaatggccctgccgacacagaaaggaaagaacccttccag
ggacaggaatcttgccctaaagcctcagggccagaggatcggtctcttagaattattaag
agaaccaagaaacctgatttacaaatctatcaacctggaagacgcctccagaccgttgcc
aaagacctgcctggccgagtggaagagaacgaggtcctcagtcaggtagagcagctcaga
gttgaggatgatgagcctgaaagggatctggggaaggatggggtcaaagccaagccctcc
agagatgaggctgagaagcacctgaagaccctgaaggggggagacaagggcaaaaagact
gaaagaggggaggggacaaggaaagtccacgatgacatgccccagggcaagcctggctcc
gccaagcgctactcgaggtcggacaagcggaggaatcgctatcgcacttgtagcaccagc
tctgctgggagcaacaacagcgccgagggtactgggctccccgatagtggtgggcggcgc
cgacgccaggatcgagccaaggagaggccacgtctgaagaagcaagtgtctatgtcttca
actgactccctggatgaagacagaactgatgagccagaccttctgggaccccgcaggagc
tcagagaggaggaagccttcggaccgaagctggtcttgccatggggagggtgaacggaga
agtgaaggtaaggagaacagaggtggccttcgagtcacttttgatgcagagatcgtgaac
aaggatgtatccatggtgagactgactaaggaagatgtggacagactgaaggctgacaga
agttcaggcagcatgggcaaggcccctgaaaagcaagagtccaaaaccccaaaccaggaa
ctgcggggtcgtggtcggggcattctgatcttgcctgcccacacagcactgtcggtcaat
acaacaggatctccagagtctacacttttgggatcaaagcttctctttggagctggtggt
aagggatctcggaatcggggccggggaggcacttcccggaggctgtgggacccaaacaat
cctgaccagaaacctgccctgaagagccagacttctcagctccacttcctagatactgat
gatgaagtcagccccacttcttggggggactcacgccaagcccagacaccttactataag
tttcaaaactctgacaatccttactattatcccaggacaccaggtcctggacctcagtat
ccctacacaggatatggcccactgcagtatcccctgggccctacaaatggggtatatcca
ggggcttactaccctggctatcctgctccatctgggcagtatgtctgtggtcctcttcct
gctagctccttgagtcctgaagagatggagcagcaggtgagggacctgcaacagcaggag
ctccatcggcttcttcgagtagccgataaccaggagctgcagctcagtaacctgctctcc
agggaccggatcagccctgagggcttggagaagatggcccagctcagagcagagctggtg
cagctttatgagcgctgcctcctgctggacattgagttctctgatcatcagaatgtggac
cagatcttatggaagagtgctttctaccaagttattgagaagttcaggcagctgcttaaa
gacccaaatgctgagaacccagagcagatcaggagcaggctgctggagctcctggacgag
ggcactggcttctttgatagtctgcttcagaaactgcaggttacataccagtttaagcta
gaggactacatggatggtctagccattcgaagcaaaccattaaggaaaatggtgaaatat
gcattaatcagtgcccagcgatgtatgatttgtcaaggagacatttccaggtaccgggag
caagccaatgatacaacaaactacggaaaagcacgaagctggtatctgaaggctcagcat
attgctcccaagaatggccgaccttataatcagttggcgttgttggctgtgtatacgagg
aggaagctggatgctgtgtactattacatgcgcagtttagctgccagcaacccaatcctt
acagccaaggagagcctcatgagcttgtttgaagagaccaagcgaaaggcagaacagatg
gagaagaaacagctggagctaagccctaatcgatggaggaaaggcaggaggtcaactttc
cggcacattggtgatgacacgacccgcctggagatttggatccacccctctcactcccga
tctcaaggcactgaatctgggaaggactctgagcaggagaacggccttggcagcttaagc
cccagcgatctgaacaaaaggttcatcctcagttttctccatgcccatgggaagctgttt
acccggattgggatggagacattcccagcagtggctgaaaaggtcctaaaggagttccaa
gtattactgcagcatagcccctctcccatcggaagcacccgcatgctacagcttatgacc
atcaacatgtttgctgtgcacaattcccaactgaaagattgcttctcggaggaatgtcgc
tccgtgatccaggaacaagccacggctctggggctggctatgttctccctgctggtgcgg
cgctgcacctacttgctaaaggaatctgctaaagctcacccgtcctcccatgaggatgag
gcagaccaggacgatatcaaggtgtcagccttcctcccagacctgaaggagctactgccc
agcgtgaaagtttggtcagactggatgcttggttatccggatacctggaaccctccaccc
acatcccttgatctgcccacacaggtcgccatggacgtgtgggcgacactcgctgatttt
tgtaacatactgacagcggtgaatcagtcggaggtaccgttgtacaaggacccggacgat
gacctcaccctcctcatcctggaagaggatcgactgctctcgggcttcgtccccctgctg
gctgccccccaagacccctgctacgtggagaaaacctcggacaaggttattgcagccgac
tgcaagagggtcacagtgctgaagtatttcctggaagccctttgtggacaagaagagcct
ctgctggcattcaagggtggaaaatatgtgtcagtggcgcccgtcccagacaccatggga
aaggaaatgggaagccaacagggaaaacaactgcaagatcaggaggacgatgtggtcatt
gaagattttgaggaagattctgaggctgaaggcagtgggggcgaatatgacatcaaggag
ctgcgcgccaggaagctcgccctggccaggaagatagcggagcaacagcggcgccaagaa
aagatccaggccgtcctggaggaccagtctcagatgaggcagatggagctagagatcaga
cccctgtttcttgtcccagacaccaatggcttcatcgaccacctggccagcctggcacgg
ctgctggagagcaggaagtacatcctcgtggtgcccctcatcgtgattaacgaactggat
ggtctggccaaggggcaagagacagaccatcgggccgggggctatgctcgagtggtacaa
gagaaggcccgaaagtccatcgagttcctcgagaggcggtttgagagccgggactcctgt
ctacgggccctgaccagccgtggcaatgaacttgaatccattgcctttcgtagtgaggat
atcactggccaacagggaaataacgatgacctgatcctctcttgctgtcttcattactgc
aaagacaaggccaaggacttcatgcctcccaacaaagatgagccgatccggcttctccga
gaggtggtgctgctgacagatgacagaaaccttcgggtgaaggcactgacaagaaacgtg
ccagttcgggacatctcagccttcctcaagtgggcgcaggtggggtga
DBGET
integrated database retrieval system
