Antechinus flavipes (yellow-footed antechinus): 127559045
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Entry
127559045 CDS
T08818
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Pathway
afz03022
Basal transcription factors
afz03420
Nucleotide excision repair
afz05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127559045
09124 Replication and repair
03420 Nucleotide excision repair
127559045
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127559045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afz03021
]
127559045
03400 DNA repair and recombination proteins [BR:
afz03400
]
127559045
Transcription machinery [BR:
afz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127559045
DNA repair and recombination proteins [BR:
afz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127559045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
127559045
NCBI-ProteinID:
XP_051848531
LinkDB
All DBs
Position
1:complement(165174270..165212889)
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPEKTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNARKHITSLKKAVDMTCHGEPSLYNSLSLAMQTLKHMPGHTSREVLIIFGSLTTCDPS
NICDLIKSLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSSTEPGLTLGGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLEAFQEVSLEEYNGERFCQGCLGELKDQHVYIC
TVCQNVFCVDCDLFIHDSLHCCPGCIHKNPAPAGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacccgaaaaaacaaaacgctgggaagggggctatgaaagaacatgggaa
attcttaaagaagatgagtctggatcacttaaagctaccatagaagacattctcttcaag
gccaagagaaaaagagtatttgagcaccatgggcaagttcgacttggaatgatgagacat
ctttatgtagttgtagatggatcaagaactatggaagaccaggacttaaagcctaataga
ctgacatgtactttaaagttactagaatactttgtggaggaatattttgatcagaatcct
attagtcagattgggataatcgtaactaagagtaagagagctgaaaagctgacagaactc
tcagggaatgcgaggaagcatataacttctctcaagaaagcagtagatatgacatgtcat
ggagagccatctctctacaattccttaagcctggccatgcagactctaaaacatatgcca
gggcatacaagtagagaagttcttatcatctttggcagtcttactacctgtgatccatct
aacatctgtgatttaatcaagagtttaaaggcagctaaaattagagtgtctgttatcggc
ttatctgcagaagttcgagtttgcactgtacttgcccgtgaaactggtggaacataccat
gttattttagatgaaagtcattataaagaactcctaacacatcatgttagtcctccacct
gccagttcaagttctgaatgctctcttattcgtatgggttttcctcagcacactattgcc
tctttatctgatcaggatgctaaaccttcttttagcatggcgcatttggatagcagtact
gaaccaggccttacattaggagggtacttttgtccacagtgtcgggcaaagtactccgaa
cttccagttgaatgcaaaatctgtggtttaacgttggtatctgctccccatctggcacgg
tcttatcatcatctgtttcctttggaggcttttcaagaagtttctttagaagaatataat
ggagagaggttttgtcagggatgcctaggggaattaaaagatcaacatgtttatatttgc
actgtgtgccaaaatgtattctgtgtggactgtgacttgtttattcatgactctttgcat
tgctgccctggttgtattcataagaatccagctcctgctggtgtgtga
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