Antechinus flavipes (yellow-footed antechinus): 127562678
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Entry
127562678 CDS
T08818
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afz03000
]
127562678
Transcription factors [BR:
afz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127562678
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
127562678
NCBI-ProteinID:
XP_051854529
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All DBs
Position
4:complement(384630988..384707597)
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AA seq
617 aa
AA seq
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MSMRSPISPQLALDGIGTMVNCTVKAEEKKDICQEAPSGQQVPAPAAEPLTGDPARPAQD
GADSSGPPQDCGSPRSDGPPEPRRSGPEPATGSQEKLDFNRNLKEVMPTIEKLLSSDWRE
RLLGRSTVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQ
QQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPMPVTPDS
QLALPIQPIPCKPVEYPLQLLHSPPTPAVKRPGAVSTHHPLQESSQPLNLTAKPKGPELP
NTSSSPNLKISTCGPLPANHGAPTRDLQASPPSLPLGFLGEGDAITKAIQDARQLLHGHS
GPMESSPNASFRKDLINLESSPAKDRLEESCGHQLDETILSCDMDGSRHFPESRNNNHIK
RPMNAFMVWAKDERRKILQACPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHL
EKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQNYVIPPPGNQMQMSSPDVL
YPRAPGMPLAQPLLEHYVPRSLDPSMPIIVNTRSLKEENEGAEDGHSVADGEMFRYSEEE
DSEVEEKSDGELVVLTD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctccccagctggcactcgatggcattgggaccatggtg
aactgcactgttaaggcagaagaaaagaaggatatatgccaggaggctccatctggccag
caggtgccagcccctgctgcagagcccttgactggagacccagcccgccccgctcaggat
ggagctgactcaagtggcccaccccaggattgcgggtccccaagaagcgatggaccccca
gaacctaggagatctgggcctgagccagccactgggagccaagaaaagctggattttaat
cggaacttgaaagaagttatgccaaccattgagaagcttctgtccagtgactggagagag
aggcttctgggaagaagcactgtggaaaccaaagatgtcaaagggacccaagaaagcctg
gcggaaaaggaacttcagctcttggtcatgattcatcagctgtccactcttcgggaccag
ctcctgacagctcactcagagcagaagaacatggccgccatgttgtttgagaagcagcag
caacagatggagctagccaggcagcagcaagagcagatagcaaaacagcaacagcaactc
attcagcagcagcacaagatcaacctcctccagcagcagatccagcaggtcaacatgcct
tatgtcatgatccctgcgttccctcccagccaccagcccatgcctgtcacccctgactcc
cagctggcattacctattcagcccatcccttgtaaaccagtggagtacccgctgcagctg
ctgcacagcccccctacccctgctgtgaagaggcctggggccgtctctacccatcaccct
ctccaggagtcttcacaacctctgaatttgacagccaagcccaaaggtccggagctgccc
aacacttccagctcccccaacctgaagataagcacctgtggtcccctccccgccaaccac
ggggctcccactcgggatctccaggccagcccacctagcctacccctaggctttctgggt
gagggtgatgctatcaccaaagctatccaggatgcccggcagctgctgcatggccacagt
gggcccatggaaagctctcctaatgcatctttcaggaaggacctcatcaacctggaatca
tccccagccaaggatcggctggaggagagctgtgggcaccagctggatgagaccatactg
agctgtgacatggatggttcccgacactttcctgagtcccggaacaacaatcacattaag
aggcccatgaatgccttcatggtgtgggccaaggatgaacgacgaaagatcctgcaagcc
tgtcctgacatgcataattccagtatcagcaaaattcttggctcccgttggaagtccatg
accaaccaggagaagcagccatactatgaggaacaggcacgactgagtcgccagcacctg
gagaagtatcctgattataaatataagcctcgacccaagcgcacatgcattgtggagggc
aagcgacttcgagtcggggagtacaaagctctgatgaggaaccggcgccaggacgcgagg
cagaactacgtgatccccccaccaggcaatcagatgcagatgagctccccggatgtcctg
tatccccgggcccccggaatgccactggcacagccccttctggagcactatgtgccccga
agcctggaccccagcatgcctattatcgtcaacacccgaagccttaaggaggaaaacgag
ggagctgaggatgggcactcggtggctgacggggagatgttccggtacagtgaggaagaa
gactccgaagtcgaggaaaaaagcgatggagagttggtggtgcttacagactga
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