Agathobaculum sp. NTUH-O15-33: RWV98_14240
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Entry
RWV98_14240 CDS
T09495
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
agat
Agathobaculum sp. NTUH-O15-33
Pathway
agat00300
Lysine biosynthesis
agat00550
Peptidoglycan biosynthesis
agat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agat00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RWV98_14240
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RWV98_14240
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agat01011
]
RWV98_14240
Enzymes [BR:
agat01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RWV98_14240
Peptidoglycan biosynthesis and degradation proteins [BR:
agat01011
]
Precursor biosynthesis
Amino acid ligase
RWV98_14240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
SRP54
MeaB
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WNX83741
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Position
complement(2948025..2949470)
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AA seq
481 aa
AA seq
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MKLRELLAGVAVENAAADLDMEIGQVRYDSRQVGPGDLFVAIRGYATDGHQYIAKALEQG
AAAIVCEEAPDGAPVVTVKNARRALAEIAANRFGHPADRMVMVGVTGTNGKTTTTYLVKH
MLEKAGHKVGLIGTNQNLIGSEIIETERTTPESYELHALFARMRDAGCTHVVMEVSSHSL
VLDRVHGIRFAVGAFTNLTQDHLDFHGTMEEYRKAKALLFSMCDKGVVNLDDPAAEAMLR
DAKCETLTFSCDKDAAGLTAKNILMRANGVEFIACTTDGLARVKLAIPGHFSVENALAAL
GIVLQLGLPIEQAAEALGTATGVKGRVEVVPTDTDYTVLIDYAHSPDGVENVLKAVRGFA
AGRVVALFGCGGDRDKTKRPKMGAIAARLADFCIVTSDNPRTEQPDAIIEDILAGMKESK
TPIKVIADRPAAIHWALDHAKKDDIIVLMGKGHETYQEINHIKHHMDEREIVAAYYAEKR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgggaactgctcgcgggcgtggcggtagaaaacgccgccgccgatctggat
atggaaattgggcaggtgcggtatgattcgcgtcaagtaggcccgggcgatctgtttgtc
gccatccgcggctacgcgacggatgggcaccaatatatcgcgaaggcgctcgaacagggc
gcggccgcgatcgtgtgcgaagaggcgcctgacggcgcgcccgtcgtcaccgtgaaaaac
gcgcgccgcgcgctggccgagatcgcggctaaccgctttggccatccggcggaccgcatg
gtcatggtcggcgtgaccggtacgaacggtaaaacgacgaccacctaccttgtcaagcac
atgctggaaaaggcgggccataaggtcgggctgatcggcaccaaccaaaatctgatcggc
agcgaaatcatcgagaccgagcgcaccaccccggaaagctatgagctgcacgcgctgttt
gcgcgcatgcgggacgcgggctgtacccatgtggtcatggaggtttcctcccattcgctg
gttttggaccgcgtgcacgggattcgtttcgcggtgggcgcgtttaccaatttgacacag
gaccaccttgattttcacggcacaatggaggagtaccgcaaagcaaaggcgctgcttttc
tccatgtgcgataagggcgtcgtaaaccttgacgacccggcggccgaggcgatgctgaga
gatgcgaaatgtgaaacccttaccttttcctgcgataaggacgcggctgggctgactgcc
aaaaacatcctgatgcgcgcgaacggcgtagaattcatcgcctgcaccacggacggattg
gcgcgggtaaagctcgcgatccccggacatttttcggtagaaaacgcgctggccgcgctg
ggcatcgtgttacagctcggcctgccgatcgagcaggcggcggaagcgctcggcactgcg
accggggtgaagggccgggtcgaggtcgtgccgaccgataccgattacacggtgctgatc
gattacgcgcattcgccggacggcgttgaaaacgtgctgaaggccgtgcgcggctttgcc
gcgggccgcgtggtcgcgctgtttggctgcggcggcgaccgcgacaagaccaagcgcccc
aagatgggcgcgatcgcggcgcggctggctgatttttgcatcgtcacttcggataatccg
cgcaccgaacagccggacgccatcatagaagatattttagccggtatgaaggaaagcaaa
acgccgatcaaggtgatcgccgaccggcccgcggccatccactgggcgctcgaccacgcg
aagaaggatgatatcatcgtgctgatgggcaagggccacgaaacgtatcaggagatcaac
cacatcaagcaccacatggatgagcgcgagatcgtggccgcgtattacgcggaaaaaagg
aagtaa
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