Anoplophora glabripennis (Asian longhorned beetle): 108917235
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Entry
108917235 CDS
T07402
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03013
Nucleocytoplasmic transport
agb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108917235
03015 mRNA surveillance pathway
108917235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agb03019
]
108917235
Enzymes [BR:
agb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108917235
5.6.2.5 RNA 5'-3' helicase
108917235
Messenger RNA biogenesis [BR:
agb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108917235
mRNA cycle factors
Common to processing body (P body) and stress granule
108917235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
ATPase
UvrD-helicase
AAA_16
SRP54
nSTAND3
AAA_22
AAA_7
AAA_10
AAA_5
Motif
Other DBs
NCBI-GeneID:
108917235
NCBI-ProteinID:
XP_023311421
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEDADLIGADTQGSECDFTDFTIPSQTQASQHDHTGPKVSGVQ
VNNNIVNKIAATTSALGELQFEEDDEEGYFNGKELPDYACKYCGIHEPNCVVMCNLCKKW
FCNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETILECYSCGVRNVFVLGFIPAKADS
VVVLLCRQPCAAQNSLKDMNWDQDQWKPLIADRCFLTWLVKIPSEQEQLRARQISAQQIN
KLEELWKENVDATFQDLEKPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKES
QTQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGEMHKTWAGVGHVIKV
PDNYGEDIGIELKNGSGAPIDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYH
RLLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSA
TIVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHN
QIRKMEGNTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDP
RLVRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQS
LFERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVSAEERKLAKIDFPWPIAD
RPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKIATRFLRSGVKPEQIGVITPYEGQRAYL
VQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVAL
TRAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLCEGPLTNLKESLIQFAKPKKLINSE
NPGSHFMTTSMFDAREAMVPGSVYDRTNTAINGQFNYPNRGMPLDMFSRTHDPISYISPE
RAQAGMNLPVPVGMFMNMAHIPPRFYNQHQQALQARQQQNPRNRKPPSRQKGKGLSQDQT
QPFSQSLQLTQGMSQPGLSQPGFSLSQPGLSQAELSQDPYMADYQSQMEGLLSQDSTYQG
DRSAFYQPSAQFSQPY
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggatgcgtatggccccagttcgcagaccctcacgtttttggacacggaggat
gcggatttgataggagctgacacccagggctcggaatgcgacttcaccgatttcaccatc
ccctcgcagacgcaggcttcccaacacgaccacaccggccccaaagtttccggggtacag
gtgaacaacaatattgttaataaaatcgcagccactaccagtgccttaggagagttgcag
ttcgaggaggacgatgaggaaggttacttcaacgggaaggaattgcccgattacgcttgt
aagtactgtggcatccacgagccgaactgcgtggttatgtgcaacttgtgcaagaagtgg
ttctgtaacggcagggggaacacttccggcagccatattatcaatcatttggtcagagca
aagcacaaggaggtgactttacacaaggacgggccgctgggagagaccatcttggagtgt
tacagttgtggagtgcgtaatgtgttcgttttgggtttcatcccggcaaaagccgactcc
gtcgttgtgttgttgtgccggcagccctgcgccgcgcaaaattccttgaaggatatgaat
tgggatcaagaccagtggaagcccctcatagcagaccgttgcttccttacctggctcgtt
aaaataccgtctgaacaggagcaactaagagccaggcaaatatccgcccaacagattaac
aaactggaggagctgtggaaggaaaacgtcgacgcgacgttccaagacctcgaaaagcca
ggcgtggacgaagaaccacaacaagttcttctgcgttacgaagacggataccagtaccag
aatattttcggtccgctggtgaagctggaagcggattacgacaaacgcttgaaggagtct
cagacccaggagaacatcgaggtgcgttgggatgtgggtctaaacaaaaagacgattgca
tattttacgctcgcgaagaccgacggcgacatgaaactgatgcacggcgacgagctgaga
cttaggtacgtcggcgagatgcacaagacgtgggcgggggtggggcacgtcatcaaagtt
ccggacaattatggcgaagacatcgggatagagttgaagaacgggtccggcgcccccatt
gattgcaacagcaatttcgtcgttgatttcatttggaaaagcacgagctttgacagaatg
caattagctttacgcaaattcgccgtcgacgacacctccgtctccgcctacatctaccac
cgcctgctggggcacgaagtcgaggaggtcctcttccgttgccacctgcccaagcacttt
tccgcacccaacctgcccgacctgaaccgatcccaagtgtacgccgtgaaacacgcccta
caacggcccctctccctaatccaaggacctcccggcactggaaagaccgtgacgtcggcc
accatcgtctaccagctagtcaagcagaacggcggccccgtcttggtgtgcgccccaagc
aacaccgccgtggaccaactgacggagaagatccacaagaccaacttgaaagtggtccgt
ttgtgcgccaaatcccgggaggccatagactcgcccgttagcttcttggcgttgcataat
cagatccggaaaatggaggggaacacggagctgcagaagttgcagcagcttaaggacgag
acgggcgagttgagttcggttgatgagaagaggtacaggatgttgaagaagctggccgag
aaggagctgttggaggccgccgatgttatttgctgtacttgtgttggtgctggcgatccg
cggttggtcaggctgaagtttcactcgatacttatcgatgaaagtatgcaggcaaccgaa
cccgagtgcatggtcccggtcgtcctgggcgtcaaacaactcatcctcgtcggcgaccac
tgccaactggggcctgtggtgatgtgcaagaaagccgcgagggccggcctctcccagagt
ttatttgaacgtctcgtagtcctcggcatcaggccgttccgactggaggtccagtacagg
atgcacccggaactgtcgaggttcccgtcaaacttcttctacgagggtagcctccagaac
ggcgttagcgcggaggaacggaaactggccaagatcgacttcccgtggccgatagccgac
agacccatgttcttcctcgtgactcaaggccaggaggagattgccggttccggcacgagc
tacttgaacaggacggaggcttccaacgtggaaaaaattgccacgagatttctacgatca
ggagtaaaaccggaacaaataggcgtgatcaccccctacgaaggccaaagggcctacttg
gtgcagtacatgcagtaccaaggatcgttacacagcaagctgtaccaggagatagaaata
gccagcgtcgacgcgttccagggtcgcgaaaaagacataataataatgtcctgcgtgcgt
tccaacgagcaccagggcatcggctttctaaacgacccccgccgactgaacgtcgcccta
acccgagccaagtacggaataatcatcgtgggcaatccgaaagtcctctcgaagcaaccc
ctctggaaccacctactgtccttttacaaggagcaaaaggtcctgtgcgaaggccccctg
accaacctcaaagaatcactgatacaattcgccaagcccaaaaagctgatcaactcggag
aatccgggctcccactttatgaccacctccatgttcgacgcccgcgaggccatggttccg
ggctcggtgtacgacaggaccaacaccgcgatcaacggccagttcaactacccgaaccgc
ggcatgcccctggacatgttcagccgcacccacgaccccatcagctacatctcgccggag
cgggcccaggcgggcatgaacctgcccgtgcccgtcggcatgttcatgaacatggctcac
atcccgccccgtttctacaaccagcaccagcaggcgctgcaggcgcgacagcagcagaac
ccgaggaaccgcaagcctccctcacgtcagaagggcaagggcctgagccaggaccagacg
cagcccttcagccagagccttcagctgacccagggcatgtcccagcccggcctgtcgcag
cccgggttcagcctgagccagccggggctgtcgcaggcggagctcagccaggacccgtac
atggccgattaccagtcccagatggaaggattactgtcccaggattccacttaccaggga
gataggtctgcattctaccagcctagcgcgcagttctcccaaccctattga
DBGET
integrated database retrieval system
