Accipiter gentilis (Northern goshawk): 126045230
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Entry
126045230 CDS
T08649
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
126045230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agen03400
]
126045230
Enzymes [BR:
agen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
126045230
DNA repair and recombination proteins [BR:
agen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
126045230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
SKA1
DUF2948
Motif
Other DBs
NCBI-GeneID:
126045230
NCBI-ProteinID:
XP_049671970
LinkDB
All DBs
Position
13:202298..208620
Genome browser
AA seq
911 aa
AA seq
DB search
MASAHASQPSKKTVAAQVPFADLCATLERMQTCKPRPEKTKYFKDFLDSWRKFHGALHQN
EKDTTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPA
GSRGDTGDFAMIAYFVLKPRSLKQGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTILSIFHPDALELHNVTTDLEKVCRQLHDPNVSLS
DVSITLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHNVFKSNIQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTAVMGRIHVVQKKSARTRKEVID
ALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTIFRSFCRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPS
NILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDVYKTDCTLRFPRIEKIREDKEWYECMTS
DMLEDLRSKAEGKLASKHLHMDAYDEPQEKKRKTVSKVKKVIGIAEQFKAPDLSGVNKVS
NVFEDVEFCVMTGTGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKKLVPWQPAFMIHMSPDTKEHFACEYDCYGDSYTADTDVAQLKE
VFSRMKDSKVMPLDMITELEEHYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTTLSV
RALELRFYGAKVVSHLEEGVSHVVIGEDHSRVKEMKALRRTFGEKFKIVSELWVTQSVEG
GVLKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgcacgcttcgcagccttcaaaaaaaacagtggccgctcaggtgcctttt
gcggacctgtgtgctactctggagcgaatgcagacgtgtaaacctcgtccggagaaaacc
aagtatttcaaggattttctggactcctggagaaaattccacggtgctcttcatcaaaac
gagaaggacaccacagattctttttatccggctatgcgacttattcttccacagttggaa
agagaaaggatggcatatggaattaaagaaactatgcttgcgaagctgtatattgaactg
cttaatttaccaaaagatggaaaagatgctgcaaagctgttaaactacaggacacctgct
ggctcacgtggagataccggggattttgcaatgatcgcgtactttgtgttaaaacctagg
agcctgaaacaaggcagactgacaatagaacaagtcaatgaacacttggatgcgatagct
aataataatgctgctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcactggaacagaaatggctcatccgcatgattataaaggatctgaagctt
ggagttagtcaacaaactatactttccatttttcatcctgatgctcttgaattacacaat
gttacaactgatttggaaaaagtttgcagacaactgcacgatcccaatgtctcacttagt
gatgtttctatcacgttgttttctgcctttaaaccaatgcttgctgctattgctgatgtc
cagcaaatcgagaaacaaatgaataaccagatattctacatagaaactaagctggatggt
gagcgtatgcagatgcacaaagatggagatgtgtataaatatttttcccgaaatgggttt
gactatactcagcagttcggcgcttccccccttgatggttcgttaacgccatttattcat
aatgtatttaagagcaatatacaaaattgcattctcgatggtgaaatgatggcttacaat
cccgagacacaaacctttatgcaaaaaggaaacagattcgacataaaaagaatggtggag
gactctgatctgcagacctgcttctgtgtgttcgatgtattgatggttaatgatcagaag
ttggggcatgaagtactaagcaaaagatacgaaatcttaagtagcgtatttactgcggta
atgggcaggatacatgttgtacagaaaaaaagtgccagaacaagaaaagaagtaattgat
gctttaaatgaagcaatagataacagagaggaagggattatggtgaaagatcccatgtcc
acctacaagcctgacaaacgtggggaaggctggttaaaaatcaaaccagaatatgtcaat
ggactgatggatgaactagaccttttaattgttggtggttactgggggaagggctcacgt
ggtggaatgatgtctcattttctgtgtgctattgcagagacgccccctccaaatgaaaaa
cctaccattttccgctctttttgtcgtgttggctctggctatactatgaaggaattgtat
gatttaggtttgaaactggctaaacactggaagccctaccataggaaggaccctccctct
aacatcttgtgtggaactgaaaaacctgaaatgtacattgaaccttgcaactctgtcatt
gttcagatcaaggcagctgagattgttaacagtgatgtgtacaaaactgactgtactttg
agattcccccgaattgagaagataagagaggacaaagaatggtacgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcagaagggaagctggcatctaagcaccttcat
atggatgcgtatgatgagccacaagagaaaaaaaggaaaactgtatcaaaggtgaagaag
gtgattggaatagctgagcaatttaaagctcctgatctttctggtgtaaacaaggtttca
aatgtatttgaagatgttgagttttgtgttatgacgggaacgggaaagtactcaaagtct
gaactggaaagcaggatagccgaatgtggtggcagcgtggtacagaacccggggccagag
acttactgtgtcattgtaggagctgagaatgtcagagtgaaaaatatcattgcttccaac
aaatacgacgtggtgagggcggagtggctccttcagtgttttcaaaccaaaaagctggtg
ccttggcaaccggcctttatgattcacatgtctcctgacacaaaagaacattttgcttgt
gagtatgattgttatggagacagctatacagcagacacagatgttgcacaactcaaggaa
gtgttctcaagaatgaaagacagtaaggtgatgcctttggacatgattacagagttagaa
gagcattattcgtggaacagctgtcagctcagtatattcagaggaaacactatttatgtg
gactgttacgctgttgttaatgagcccagaaccaaaatccatggaacaacactatcagtt
agggctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggtgtc
tcccatgttgttataggagaagatcattcccgggtaaaagagatgaaagcactcagaaga
acatttggggaaaaatttaaaattgtatctgagctgtgggtaacacagtcagtggaggga
ggagtcctgaagaatgaaaatcagtacttaatttaa
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