Aphidius gifuensis: 122852786
Help
Entry
122852786 CDS
T07796
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
agif
Aphidius gifuensis
Pathway
agif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122852786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
agif03041
]
122852786
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122852786
Spliceosome [BR:
agif03041
]
Complex A
U2 snRNP components
U2 related factors
122852786
Complex B
122852786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
122852786
NCBI-ProteinID:
XP_044008730
LinkDB
All DBs
Position
LG1:complement(22259225..22262633)
Genome browser
AA seq
1019 aa
AA seq
DB search
MVRSNDKDRHHRRRSRTRSRSRDREKISRHRDRHSRSRERDRDRRSERSERERERDRDRK
PSDSKEKRVESSSSKSSRSGKERKRSRSREKKEKEKIENEELPFDHTKLDKEEEQKRLEL
EMQKRKERIERWQVERKKNENKTMILANLQIPRKWTLENDSDEEPLSIINDTTINKEKDE
IEEEVGEEKNDTNKETEENEIDPLDAFMAGVQEEVRKFNNVEGKGKIGSTNGTTGNGSGT
AGTSQSGGVVIVTGVAKKKIQKEKGELIEQNQDGLEYSSEEEGENLHETAAGIANKQKRE
LAKVDHSTTDYMPLRKSFYVEVPEISRMTQDEVDLYKEELEGIRVKGKGCPKPIKSWAQC
GVTKKELEILKKLNYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQ
PSLVDGDGPIAVIMTPTRELCMQIGRDSKKFTKQLGLSHVCVYGGTEISKQIAELKRGAE
IIVCTPGRMIDMLAANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMRIMENVRPDRQTV
LFSATFPRQMEALARRILTRPVEVQVGGRSIVCKEVEQHVIVLEEDQKFYKLLEILGHYQ
AKGSIIVFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDFKAGRTKLLIATS
VAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITPEQERYAGEIVRA
HELASVAVPDALRRLWDRYRARQAADGKKVHTGGGFSGKGFKFDESEAALANEKKKFQKA
ALGLQDSDDEDVENDIDQKIESMLAPKRTVREITRPVAAAANITIPGQPVASATDKLELA
KKLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAKLNTKLNYQPR
EEDLIEGDSETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGLTVRGTYI
LNGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQSSGTHSGSRGRYKVL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaagcaatgacaaagatagacatcatagacgtcgttcaaggactagatctcgt
tctcgtgatcgtgaaaaaatatcacgtcatcgagatagacacagtagatctcgtgaacga
gatcgtgatcgtcgtagtgaacgttctgaacgtgaacgtgaacgtgatagagatagaaaa
cctagtgatagtaaagaaaaacgtgtagaatcatcatcatcaaaatcatcaagatctgga
aaagaacgtaaacgttcaagatcacgtgaaaaaaaagaaaaagaaaaaattgaaaatgaa
gaattaccatttgatcatacaaaacttgataaagaagaagaacaaaaacgtttagaatta
gaaatgcaaaaaagaaaagaaagaattgaaagatggcaagttgaaagaaaaaaaaatgag
aataaaactatgatattagctaatcttcaaataccaagaaaatggacattagaaaatgat
agtgatgaagagccattatcaataataaatgatacaacaataaataaagaaaaagatgaa
atagaagaagaagttggagaagaaaaaaatgatacaaataaagaaactgaagaaaatgaa
attgatccacttgatgcatttatggctggtgtacaagaagaagttagaaaatttaataat
gtcgagggtaaaggaaaaattggatcaacaaatggaactactggtaatggtagtggtaca
gctggtacatcacaaagtggtggtgttgttattgtaacaggtgttgctaaaaaaaaaatt
caaaaagaaaaaggtgaattaattgaacaaaatcaagatggtcttgagtattcaagtgaa
gaagaaggtgaaaatctacatgaaactgctgctggtattgctaataaacaaaaaagagaa
cttgctaaagttgatcattcaacaactgattatatgccacttagaaaatcattttatgtt
gaagtaccagaaataagtcgtatgacacaagatgaagttgatctttataaagaagaactt
gaaggtattagagttaaaggtaaaggttgtccaaaaccaattaaatcatgggcacaatgt
ggtgttactaaaaaagaattagaaatattaaaaaaattaaattatgaaaaaccaacgcca
attcaatgtcaagcaataccagcaataatgtcaggtagagatttaattggaattgcaaaa
acaggaagtggtaaaacacttgcatttttattaccaatgtttagacatatattagatcaa
ccatcattagtagatggtgatggaccaattgctgttataatgacaccaacaagagaacta
tgtatgcaaattggtagagattctaaaaaatttacaaaacaacttggattaagtcatgtt
tgtgtatatggtggtactgaaatatcaaaacaaattgctgaacttaaacgtggagctgaa
attattgtatgtacaccaggtagaatgattgatatgcttgcagcaaatagtggaagagtt
acaaatttaaaaagagttacatatattgtattagatgaagctgatagaatgtttgacatg
ggttttgaaccacaagttatgcgtattatggaaaatgttagaccagatagacaaacagta
ttattttcagcaacatttccacgacaaatggaagcacttgctagaagaatattaacacga
ccagttgaagtacaagttggtggtagatcaattgtatgtaaagaagttgaacaacatgtt
attgtacttgaagaagatcaaaaattttataaattattagaaattcttggtcattatcaa
gctaaaggttcaataattgtatttgttgataaacaagaaaatgctgatacattattaaaa
gatcttatgaaagcaagttattcatgtatgtcattacatggtggaattgatcagtgtgat
cgtgattcaacaatattagattttaaagctggaagaacaaaacttcttatagcaacatct
gttgctgcacgtggattagatgttaaacaattagtattagttgttaattatgattgtcca
aatcattatgaagattatgttcatagatgtggtagaactggacgtgcaggaaataaagga
tatgcatatacatttattacacctgaacaagaacgttatgctggtgaaattgttagagct
catgagcttgctagtgttgctgttccagatgctttaagaagattgtgggatcgttataga
gctcgtcaagcagcagatggtaaaaaagtacatactggaggtggttttagtggtaaagga
tttaaatttgatgaaagtgaagcagctcttgcaaatgaaaaaaagaaatttcaaaaagca
gcacttggtctacaggattctgatgatgaagatgttgaaaatgatattgatcaaaaaatt
gaaagtatgcttgcaccaaaaagaacagttagagaaataacaagacctgttgctgctgct
gctaatataacaataccaggacaaccagttgcaagtgcaacagataaacttgaattagct
aaaaaacttgcatctaaaataaatattgctaaaaatttaggtgctgaagctaaaggtgca
actcaacaagctgctgaagctatattaaaaggtgctggaccaacaaatcttataacagct
aaaacagttgctgaacaattagcagcaaaattaaatacaaaattaaattatcaaccacgt
gaagaagatcttattgaaggagattctgaaactggtgaacaaacatttagaaaatatgaa
gaagaattagaaattaatgattttccacaacaagctagatggcgagtaacaagtaaagaa
gcattagcacaaatatctgaatattcagaagctggtttaactgttagaggtacatatatt
cttaatggtaaagcaccaccagaaggtgaaagaaaactttatcttgctattgaatcaaca
agtgaacttgctgttagcaaagctaaagccgaagtatctagattaattaaagaagaactt
attaaacttcaatcatctggtactcattcgggatcacgtggacggtacaaagttttgtaa
DBGET
integrated database retrieval system
