Aphidius gifuensis: 122853547
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Entry
122853547 CDS
T07796
Name
(RefSeq) putative ATP-dependent RNA helicase ECM32
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
agif
Aphidius gifuensis
Pathway
agif03013
Nucleocytoplasmic transport
agif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122853547
03015 mRNA surveillance pathway
122853547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122853547
Enzymes [BR:
agif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122853547
5.6.2.5 RNA 5'-3' helicase
122853547
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122853547
mRNA cycle factors
Common to processing body (P body) and stress granule
122853547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
ResIII
Viral_helicase1
SLFN-g3_helicase
PIF1
UvrD-helicase
AAA_16
Rad17
Zeta_toxin
nSTAND3
AAA
FtsK_SpoIIIE
T2SSE
RNA_helicase
DEAD
ATPase_2
AAA_14
AAA_29
AAA_22
AAA_18
AAA_5
Helicase_RecD
MeaB
Motif
Other DBs
NCBI-GeneID:
122853547
NCBI-ProteinID:
XP_044009983
LinkDB
All DBs
Position
LG3:5770702..5774061
Genome browser
AA seq
634 aa
AA seq
DB search
MNSTSQISNINVTDKTAMFDFFDAIFGWDPQWFDDPTASSSRDTVTMAQILGNNCPVLNS
TTLCYDNEEEYYYTMIPLIIHEFFYGLMKDINEDQDSPSSDDDVGKISNRKVLGIVKDSQ
PKIIEIKLKYFKKKIFAYVHDINTSEITEQNNRSFIHVYTVITRDILIIQNQKIKLKSVM
PIKQNLRILQAVTSLSQSPLCNSIIKPNYHDYNMSIGKKSLSLSPERSLNPIQMKIVTGI
VQTVQESKPKILLIQGPPGTGKSTVITSMIFELINSLNINIVRIGPDEKIDPKVKASVGL
STLVSRENNLTRNRNKKESKYEEEVIKNAHVIASTLSSCYSYRMEMIFGKKNGIKIPICI
VDEAGQSSEAVTLIPLMLGVKTLVLVGDPKQLPPTIISPDAKTHGMDLSLFYRMVDPIAS
WPNRHFYNGEIKNADDNIKVSFPLCHYKIFNHNETQSFREFANKPELTPFIENKNLETIG
EKVQQKIEQKLPVKVNEKKKDITDKQASSNIANDIMKIINGIAKLSLNCDNQVDKPQQKN
FYVNNNEFLKKFIGSSFDEEEEFLTLKEIEETEITLKNIDKLFKLYDQWRSIEVNTVDSF
QGQERDIIIMSCVRSRGIGFVGDPNRLNIYYVLV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaattctaccagtcaaatatccaacatcaatgtaacagataaaacagcaatgtttgat
ttttttgatgcaatttttggttgggatcctcaatggtttgatgatccaacagcatcatca
tccagagatactgtaacaatggctcaaatacttggtaataattgtccagtgcttaattca
acaacactttgttacgacaatgaagaagaatattattacacaatgatacctttgattatt
catgaatttttttatggtctaatgaaggacattaatgaagatcaagattctccaagctct
gatgatgatgttggaaaaattagcaacagaaaagtacttggtattgtcaaagattcacaa
ccaaaaataattgaaataaaattaaaatatttcaaaaaaaaaatatttgcatatgttcat
gatataaataccagtgaaataacagaacaaaataatcgttcatttattcatgtctacact
gtgataacacgtgatattttaattattcaaaatcaaaaaattaaattaaaaagtgtcatg
ccaattaaacaaaatctacgtattttacaagcagttacaagtttatcacaatcaccatta
tgtaattcaataataaaaccaaattatcatgattataacatgtcaattggtaaaaaaagt
ttgtcattatcaccagagagaagtttaaatccaatacaaatgaaaattgttactggtatt
gttcaaacagttcaagaatcaaagccaaaaattcttctgattcaaggaccgcctggtact
ggtaaatcaactgttataacatcaatgatttttgaattaataaacagtttaaatataaat
attgtacgtattggtcctgatgaaaaaattgatccaaaagttaaagcttcagttggtcta
tcaacacttgtatcaagagaaaataatttgacaagaaatagaaataaaaaagaatcgaaa
tatgaagaagaagttattaaaaatgcacatgttattgcatcaacattatcatcatgttat
tcatacagaatggaaatgatatttggtaaaaaaaatggtattaaaataccaatttgtatt
gttgatgaagctggacaatcatcagaagcagtaacattaattccattgatgcttggtgtt
aaaacacttgttcttgttggtgatccaaaacaactaccaccaacaatcatttcaccggat
gccaaaacacatggaatggatttatccctattttatcgaatggttgatccaattgcctcg
tggccaaatcgacatttttataatggagaaattaaaaatgctgatgataatattaaagtt
tcatttcctttgtgtcattataaaatatttaatcacaatgaaacacaaagttttagagaa
tttgcaaataaacctgagttaacaccatttattgagaataaaaatcttgaaacaattggt
gaaaaagtgcaacaaaaaattgaacaaaaattaccagtaaaagttaatgaaaaaaagaag
gatattactgataaacaagcatcatcaaatattgcaaatgatattatgaaaatcatcaat
ggaattgctaaattgtcattaaattgtgataatcaagttgataaacctcagcagaaaaat
ttctatgtaaataataatgaatttcttaaaaaattcattggctcatcatttgatgaagaa
gaagaatttttgactctcaaagagatagaagaaactgagataacattaaaaaatatcgac
aaattatttaaactgtatgatcaatggcgaagtattgaagttaacactgtagacagtttt
caaggtcaagaacgagatattattattatgtcatgtgtacgaagtagaggtattggtttt
gttggtgatccaaatagactaaatatatattatgtacttgtttaa
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