Aphidius gifuensis: 122857422
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Entry
122857422 CDS
T07796
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
agif
Aphidius gifuensis
Pathway
agif03022
Basal transcription factors
agif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122857422
09124 Replication and repair
03420 Nucleotide excision repair
122857422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agif03021
]
122857422
03400 DNA repair and recombination proteins [BR:
agif03400
]
122857422
Transcription machinery [BR:
agif03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122857422
DNA repair and recombination proteins [BR:
agif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122857422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
122857422
NCBI-ProteinID:
XP_044015519
LinkDB
All DBs
Position
LG5:7011917..7013791
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AA seq
404 aa
AA seq
DB search
MGDDDNPKEYRWETGYEKTWEAIKEDESGGLEASVADIIHKAKRKRQLEKTGTARLGMMR
HLFIVLDGSEAMSIQDLKPTRLICSIKLLEGFIDEFFYQNPISQLGLIVTKNKRAEKISD
LSGNTKKHLKEIKGLLGSTPLAGEPSLQNSLELALKSLKNLPSHASREILVIMGSLTTCD
PGNISDSIQNLKTEGVRCSVINLAAELHICKKIATSTGGEHGVVLDDKHFKDQLYMHIDP
PPAATRLEAALVKMGFPHHSLASLGTDPTPISVCMCHADSKDELVKLTSAGYLCPQCLSK
HCDLPVECRSCGLTLVSAPHLARSYHYLFPVKHFTEVEFDETLKNCFGCQKTLTSLDKKV
YVCEKCSHSFCLDCEIFIHESLHTCPGCATNQNSFKQPTGNNNT
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgatgataatccaaaagaatatcgttgggaaactggctatgaaaaaacatgg
gaggcaattaaagaagatgaatctggtggtttggaagcatcagttgctgatattattcat
aaagctaaaagaaaaagacaattagaaaaaacaggtacagctagacttggaatgatgaga
catctttttattgttttggatggttctgaggcaatgtcaattcaagatttaaaaccaaca
cgactcatctgttcaataaaacttcttgagggatttattgatgaatttttctatcaaaat
ccaataagtcaattgggattaatagttaccaaaaataaaagagctgaaaagatcagtgat
ttatctggtaatacaaagaaacacttaaaggaaattaaaggactacttggttcaactcca
ttagctggtgagccatcattacaaaattcattagaactagcattaaaatcattaaaaaat
ttaccatcacatgctagccgtgaaatattagtaataatgggatcattaacaacttgtgat
cctggtaatatatctgactctattcagaatttaaaaacagaaggtgtaagatgtagtgtt
attaatcttgctgctgaattacatatttgtaaaaaaatagcaacaagtactggtggtgaa
catggtgttgtacttgatgataaacattttaaagatcaattgtatatgcatattgatcca
ccaccagcagcaacacgacttgaagcagcacttgttaaaatgggatttcctcatcattca
ttagcatcattgggaacagatccaacaccaataagtgtttgcatgtgtcatgctgatagt
aaagatgagctagtaaaattaacaagtgctggttatttatgtcctcaatgtttatcaaaa
cattgtgatttaccagttgaatgtagatcatgtggacttacccttgtttctgcaccacat
cttgcacgttcatatcactatttatttccagttaaacattttactgaagttgaatttgac
gaaacattaaaaaattgttttggctgtcaaaaaactctaacgtcacttgacaaaaaggtt
tatgtttgtgaaaagtgttcacatagtttttgtcttgattgtgaaatattcattcacgaa
tcacttcacacgtgtcctggatgtgcaacaaatcaaaattcattcaaacaaccaactgga
aataacaacacgtga
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