Aphidius gifuensis: 122858274
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Entry
122858274 CDS
T07796
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
agif
Aphidius gifuensis
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agif03021
]
122858274
03041 Spliceosome [BR:
agif03041
]
122858274
Transcription machinery [BR:
agif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122858274
Spliceosome [BR:
agif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122858274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122858274
NCBI-ProteinID:
XP_044016992
LinkDB
All DBs
Position
LG5:19287825..19295189
Genome browser
AA seq
1662 aa
AA seq
DB search
MDAVKAFTSELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQLTFLNLLKCPPEDKSKVIRVLNLWQKN
AVFPPEVIQPLFDLADPNHPIHKEQAIINANGGIATNIGNNLSGFGAISKTSSPGINKNI
NKEQKLFTTKTIDPGWLAQTKLEAANANKLLGQVGSNQVDATFLDQLQHLHQLLLKKQDA
SNEAQNSVKFDKKLLDYDYGEEEDDDVIIANSPATGTSSSTNQHNPSTSSNLESLGLLLA
NPEVLRQLQTLQHTMQQGGGSASATQHEMEEKMRKLQQMKQQEDEFDKHLAQTVSNLPFA
SECELKPSDIIKTNSINMYNSAGMMQQDMSQPPPGYPPAFVSQPQSSSGLRQMINQKSPL
IDERQDSDDYPIAISSTRRDSSSVEIVNLDSYRSQSRSPERFRRHSRSRSPRHRRDRDRD
RKSRSRSRSRRQRSRSRDRKRDDSREREKIISEEEREKQRERRKRGLPMIVREKMSVCST
TLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKLKMYKM
QGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLNNVTERDLELLEEGGMIDEDTI
PPKLIDKYSSLVKLKHSSSSSATGTTTTTITTTNDNTQSVGSTPLTTLNDTIMPVSSSSQ
QTLIDTSQPPPIRATASSGLMQPNNAQLSMMPPGFSMAGVPRMLGPMGLQMGLMPNVPIG
VPPPSMQSLLGPGMMQSMLNQSVNSPFGSGVGILAQIPMPAPAAPSDKTNATGMPHNVPP
MGVPPPPPTNDLPNLPNLPMLRQTFGVGLPPPPMQLQMQIQQQQQQQQQQSEDMDVEMED
AMPQNSINPPKDKPNLSDQLLAAMGKGSMSENERDIRDRERERRDRGERGDRERSDNTRE
RGRERGRGRDRRRSERDERRNDDRRGDRDMRTHDGPPQLPGLLPDPDINIKKDKLSLAER
LRQLADGTLPIEDRMDRIHERGGGDRSIERNDNRLPVPFEDPLNVRRPDGGPPSLMDLPK
FPIPNERDFPSRGPDFRPPQDIRDFSRNERDRGSFNSRGGGSGSVVGAGGRGPIDDFTDP
RMLGARFPDEFDRLGPAGPRPDDFDLRLHPREDFDRPEIRRHPMDDYEAERLEFEMRQRE
GFDPRMNDGFDPRLHPDHPDFDPRRREFFGHMETGPPGFGAMMGNRGGPPRGPMVPDAFS
RTPIGGRGHGPPALPLFHGRGMGGPGPRGNMRPPGMRPFGPRGSGPPFDPREGDAFFRSP
FDDGRGPPAGHMRPFGGPHPMGGDGPWRGQENIPWVDGNGIDPDDIQRDNHSRDNTKGGG
HGREGNKHQDRDRERDRDRDRDRNSRNRKSRWGNASPSHDDHHDNTTSEQDNKDNNEKVK
TDNNEQGIDEEMWTPITDKNDDDNNDSCNHNDNDKNKKELSDNKDDNVAVKNEQKDDKNS
VNHVPSMRENLSENNDNNDDNDDHDMPLEKDVKQVINKDDNNEIINFKNENIEIKNNDEQ
FNNDKSNFDESKNINIKSDEFDLERPNKNDNLTSCEDNNHVIIKENNDESVVSTTNDNFS
DHFDVQPPSKDEVSLTTELSASQESSEQISVANITTEVNETL
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgttaaggcatttacatccgagctatcggcattgtacgatgtcaagccgcca
atatcaaaggccaagatgaactccctcaccagaggggcaataaaagcaattaaattttat
aaacacgttgttcaaagtgtcgagaaatttatccaaaaatgtaaaccagaatacaaagtt
cctggtctttatgttattgattcaatagtgcgacaatcaagacatcaatttggagttgaa
aaagatgtatttgctccacgttttgctaaaaatatgcaattaacatttttaaatttatta
aaatgtcctccagaagataaaagtaaagtaataagagtattaaatttatggcaaaaaaat
gctgtatttccacctgaagtaatacagccattgtttgatcttgctgatccaaatcatcca
attcataaagaacaagcaattattaatgcaaatggtggaatagcaacaaatataggaaat
aatttatctggtttcggtgcaatatcaaaaacatcatcacctggtattaataaaaatata
aataaagaacaaaaattatttacaacaaaaacaattgatccaggatggcttgcacaaaca
aaattagaagcagcaaatgctaataaattacttggacaagttggttcaaatcaagttgat
gcaacatttttagatcaattacaacatttacatcaattattattaaaaaaacaagatgca
tcaaatgaagcacaaaattctgttaaatttgataaaaaattattagattatgattatggt
gaagaggaagatgatgatgttattattgcaaattcaccagcaactggtacatcatcatca
acaaatcaacataatccaagtacaagtagtaatcttgaatcattgggtttattattagca
aatccagaagtattaagacaactacaaacattacaacatacaatgcaacaaggtggtggt
agtgcatcagcaacacaacatgaaatggaagaaaaaatgcgtaaattacaacaaatgaaa
caacaagaagatgaatttgataaacatcttgcacaaacagtatcaaatttaccatttgca
tctgaatgtgaattaaaaccatcagatattattaaaacaaattcaataaatatgtataat
tcagctggtatgatgcaacaagatatgagtcaaccaccacctggttatccaccagcattt
gtatcacaaccacaatcatcaagtggtttaagacaaatgataaatcaaaaatctccatta
attgatgaacgacaagattcagatgattatccaatagcaatatcatcaacacgtagagat
agttcaagtgttgaaattgttaatttagattcatatagatcacaaagtagatcaccagaa
cgttttagaagacacagtagatcaagatcaccacgtcatagaagagatagagatagagat
agaaaatcaagatcaagaagtagatcaagacgacaaagatcaagatcacgtgatagaaaa
agagatgatagtcgtgaaagagaaaaaataataagtgaagaagaaagagaaaaacaacgt
gaaagaagaaaacgtggtttaccaatgattgtacgtgaaaaaatgagtgtttgtagtaca
acattatgggttggacatttatcaaaacttgtacatcaagaagaattatcagatacattt
ggtgaacttggtgatattgttagtattgatttaatatcaccacgtggttgtgcttttata
tgtatgaatagaagacaagatgcatatagagcattaactaaacttaaaatgtataaaatg
caaggtaaagcaataacattagcatgggcacctggtaaaggtgtcaagggtaaagaatgg
aaagattattgggaagttgaacttggagttagttatataccatggaataaattaaataat
gttactgaacgtgatttagaattattggaagaaggtggtatgattgatgaagacacgata
ccaccaaaattaattgataaatattcatcattagttaaattaaaacattcatcatcatca
tcagcaacaggaacaacaacaacaacaataacaacaacaaatgacaatacacaatctgtt
ggatcaactccattaacaacattaaatgacacaataatgccagtatcatcttcatcacaa
caaacactaattgacactagtcaaccaccaccaataagagcaacagcatcatctggcttg
atgcaaccaaataatgcacaactttcaatgatgccacctggtttttcaatggctggagtt
ccacgtatgcttggaccaatgggattacaaatgggattgatgcccaatgttccaattggt
gtaccaccaccaagtatgcaaagtttactaggaccaggaatgatgcaatcaatgcttaat
caatcagttaattcaccatttggtagtggtgttggaatactagcacaaataccaatgcca
gcacctgctgcaccatcagataaaacaaatgcaactggaatgccacacaatgtaccacca
atgggtgtaccaccaccaccaccaacaaatgatcttccaaatcttccaaatcttccaatg
cttcgtcaaacatttggtgttggtcttccaccaccaccaatgcaattgcaaatgcaaatt
caacaacaacagcaacaacaacaacaacaatctgaagatatggatgttgaaatggaagat
gcaatgccacaaaattcaataaatccaccaaaagataaaccaaatttaagtgatcaatta
ctagcggcaatgggaaaaggttcaatgtcagaaaatgaacgtgatataagagatcgtgaa
cgtgaacgtagagatcgtggtgaacgtggtgatagagaacgtagtgataatactagagaa
cgtggacgtgaacgtggtagaggtagagatcgtagaagaagtgaacgtgatgaacgaaga
aatgatgatcgtagaggagatagagatatgagaacacatgatggtccaccacaattacca
ggtttattaccagatccagatattaatattaaaaaagataaattaagtttggctgagaga
ttacgtcaattagctgatggtacattaccaattgaagatcgtatggatagaatacatgaa
cgtggtggtggtgatcgtagtattgaaagaaatgacaatagattaccagtaccatttgaa
gatccattaaatgtaagacgtcctgatggtggtccaccatcattaatggatttacctaaa
tttccaataccaaatgaacgtgattttccatctcgtggaccagattttcgtccaccacaa
gatatacgtgatttttcaagaaatgaacgtgatcgtggtagttttaattcacgtggtggt
ggtagtggaagtgttgttggtgctggtggacgtggtccaattgatgattttacagatcca
cgtatgcttggtgctagatttcctgatgaatttgatagacttggaccagctggaccaaga
ccagatgattttgatttacgtttacatccaagagaagattttgatagaccagaaatacgt
agacatccaatggatgattatgaagcagaaagattagaatttgaaatgcgacaaagagaa
ggttttgatccaagaatgaatgatggatttgatccaagattacatcctgatcatcctgat
tttgatccaagaagaagagaattttttggacacatggaaactggtccaccaggttttggt
gctatgatgggtaatagaggaggaccaccaagaggtccaatggtaccagatgcattttca
agaacaccaattggtggtagaggacatggtccaccagctttaccactatttcatggacgt
ggaatgggtggtccaggtccacgtggtaatatgcgaccaccaggaatgcgtccatttggt
ccacgtggtagtggtccaccatttgatccacgtgaaggtgatgcatttttccgttcacca
tttgatgatggacgtggacctccagctggtcatatgagaccatttggtggtcctcatcca
atgggtggtgatggtccatggagaggacaagaaaatataccttgggttgatggtaatggc
attgatcctgatgatattcaacgtgataatcattcacgtgataatactaaaggtggaggt
catggtcgtgaaggtaataaacatcaagatagagacagagaaagagatcgtgatcgtgat
agagatagaaattcaagaaatagaaaatcaagatggggcaatgccagtccgtcacatgat
gatcatcatgataatacaacatctgaacaggataataaagataataatgaaaaagtaaaa
acagataataatgaacaaggtattgatgaagaaatgtggacaccaattactgataaaaat
gatgatgataataatgattcttgtaatcataatgacaatgataaaaataaaaaagaatta
tctgataataaagatgataatgtagctgttaaaaatgaacaaaaagatgataaaaattct
gtaaatcatgtgccatcaatgagagaaaatttgtctgaaaataatgataataatgatgat
aatgatgatcatgatatgcctttagagaaagatgttaaacaagtaataaataaagatgat
aataatgaaataataaattttaaaaatgaaaatattgaaattaaaaataatgatgaacaa
tttaataatgataaatcaaattttgatgaaagtaaaaatataaatattaaaagtgatgaa
tttgatcttgaaagaccaaataaaaatgataatttaacgtcatgtgaagataataatcat
gttattattaaagaaaataatgatgaatcagttgtatcgacaacaaatgataattttagt
gatcattttgatgttcaaccacccagtaaagatgaagtatcattaactacagaattatca
gcatctcaagaatcgagtgaacaaataagtgttgctaatattactactgaagtaaatgaa
acattgtaa
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integrated database retrieval system
