Ashbya gossypii (Eremothecium gossypii): AGOS_ACR008W
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Entry
AGOS_ACR008W CDS
T00167
Name
(RefSeq) ACR008Wp
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ago
Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AGOS_ACR008W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ago03400
]
AGOS_ACR008W
Enzymes [BR:
ago01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AGOS_ACR008W
DNA repair and recombination proteins [BR:
ago03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AGOS_ACR008W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
BRCT_2
DNA_ligase_A_N
RNA_ligase
BRCT
mRNA_cap_enzyme
TIR_3
Motif
Other DBs
NCBI-GeneID:
4619536
NCBI-ProteinID:
NP_983411
UniProt:
Q75CA4
LinkDB
All DBs
Position
III:368912..371857
Genome browser
AA seq
981 aa
AA seq
DB search
MVIYPWLKNTTELTIALPKKPIIHANMDVLGSPRGGTPTGEHEINAQDGSPINFSPSPDF
CWLCDELFIKLEEVALKKKDLGKPRKVRNLEITSNFVSLWRKTVGNDIYPALVLSLPYND
RRSYRVKDVTLVKALCKHMKLPRNSETERRLLHWKQNAPRGVKLSTFCVEELQKRRREPV
VPKRMSIDEVNGMLDKLEHESNVGKWSYISLAESPAFNYCLEHMSYVELRFFFDIVLKVP
IVSGLESLLLSCWHPDAESYFKVVSDLRIVAHTLYDPNERLEKNDLSVRIGYAFAPHMAQ
RVKIPYEKVSTKLGNDFYVEEKMDGDRIQVHYMDYGNSIAYFSRNGINYTYLYGENSSKG
SISNHLKFVEGVKECILDGEMVSYDKEMQCILPFGLTKSGASHQVNFETTGHTEPTYRPL
YAVFDLLYLNGQLLTNQDVVKRKEYLEKILIPSKNVVHLLSGPRCSDAEAITAALGAAVA
HGSEGIVLKKARSKYSVGKRDDSWIKIKPEYLENFGENMDLVVIGRDKGRKDSFICALAV
TDDSEKNNPSSYESGSDSDSDSEPIIVQPKIEKFISFCSIANGISNEEFKEIDRLTRGNW
FPYDERKPPTDWVEFGTKTPREWIDPKNSVVLEVKARSIDNEESKSDLYKTGSTLYNAYC
KRIRHDKNWSTASTVAEYDTAREARSYFNVSQNAKFGKDRSSPRKRRTFHLVGDIDVTKP
SKADFLKGYYFYVTSGYFDLQSKKNIDASEIGEAVVSCGGTYIHNLRIRASLDKLYILGC
KDTRELKMLIERGYDIIHPEWLMDCVKYGTMLQIEPKYVYSASEELMKQARNQEDKYGES
YQLPVTEDTLKALANKQVEEGYASEMGTDAVSEYERLLIFKGWLFYILDDYAYHSSWSDI
VKWNIESCGGEVTNDLELATIVVAVKDCFSQLSLQAVRNNIGARITGSNDVQPIPKIVTS
EWVEACMEAQYLVDEDEYAAI
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggtgatttatccttggcttaagaacactacagagttgacgattgctcttcccaagaag
cccatcattcatgcaaatatggatgtgttaggttctcctcggggcggaacaccgacaggc
gaacatgaaataaatgcacaagatggaagcccgataaacttttcaccctctcctgacttt
tgttggctctgcgatgagctattcatcaaactagaggaagtcgcactaaaaaagaaggac
ctagggaagccgcggaaggtgcgtaacctagaaatcacttcgaactttgtaagtttgtgg
aggaagactgtcggtaatgatatatatccagctttagttttaagcctaccatacaacgat
cgtcgctcgtatcgcgtgaaggatgtgaccttagttaaggccctttgcaaacatatgaag
ctaccaagaaactctgaaacagaacgccgtttgctacattggaaacagaacgccccaaga
ggagtcaaactgtccactttttgcgttgaagagctacaaaagcggcgacgagaaccggtt
gtgccgaaaagaatgtcgattgatgaggttaatggaatgttggataagcttgagcatgaa
agtaacgttggaaaatggagttatataagcttggcagaatctccagcctttaactactgc
ttggagcacatgagttacgttgagctgcgttttttttttgatatagtattgaaggtgccc
atagtcagcggtcttgaaagtctgcttctcagttgctggcacccggatgctgaaagctac
tttaaagttgtttcagaccttcgaattgttgcacatacgctatatgaccccaacgagcgg
cttgaaaagaatgacctctcagtccggataggctacgcctttgctccacacatggcgcag
cgcgtaaagattccttatgagaaagtttccacaaaacttggcaatgacttctacgtggaa
gagaaaatggatggcgatcgaatacaggtgcattacatggactatggaaactcaattgcg
tattttagccgaaatggaataaactatacgtatttgtatggcgaaaactcttccaaagga
tcaatttcgaaccatttaaagtttgttgaaggtgtaaaagagtgcattctcgatggcgaa
atggtcagttatgataaggaaatgcaatgcatacttccttttggtttaaccaaatcaggc
gcaagtcaccaagtaaattttgaaactacaggccacacggagccgacatatcggcctctg
tacgcagtgttcgatttgctttatctcaacggacagttattaactaaccaagacgtagta
aagagaaaagagtatcttgaaaaaattctcattccatctaaaaatgtggttcacctacta
agtggccctagatgctcggatgcagaggcgataactgcagctttaggtgctgcggtagcc
catggatcagagggaattgtattgaaaaaggcccgttccaaatacagtgttggaaagcga
gatgattcctggatcaagataaaaccggaatacttggagaatttcggagaaaacatggat
ctagttgttattgggcgtgataaagggagaaaggattcatttatatgtgcactggcggtt
actgatgacagtgaaaaaaacaatccatcttcgtatgagtccggaagcgatagtgattcc
gattctgaaccaataattgttcaaccgaagatcgagaaatttatctcattctgtagcatt
gcgaatggtatttcaaatgaagagtttaaggaaatagatagattgacgcgagggaactgg
tttccatatgatgaaagaaaaccgcctacggattgggtagaatttggtacaaagacacct
agagaatggattgacccgaagaattcagttgtgctagaggtaaaagctaggtctatcgat
aacgaagagtcaaagtcagatctgtacaaaacaggaagcacactttataatgcatactgt
aagcgtatccgacacgataaaaattggtccactgccagtacagttgcagagtatgacacc
gcaagggaagccaggagttactttaatgtttcccaaaatgcgaagttcggtaaagacaga
agttctcctcgaaaaaggaggacgttccatctggtaggtgatattgacgttactaagcct
tcaaaggcggactttttgaaaggttactacttttacgttacgagtgggtattttgaccta
cagtcaaaaaagaacatcgatgcgtcagaaattggcgaggcagtagtcagctgtggggga
acttatatacacaacctaaggatccgggcaagcttagacaagctttatatccttggctgt
aaagatacaagagagttgaaaatgctcatcgaacgaggttatgatattatacacccggag
tggctcatggactgtgtcaaatatggtaccatgctacagatagaacctaaatacgtctac
agcgcctctgaagaactaatgaaacaagctcgtaaccaagaggacaaatatggagaaagc
tatcagttacccgtaacggaggatacgcttaaggctttggccaataagcaggtggaagaa
ggatatgcatcagaaatgggtacagacgcagtgtcagagtatgaaagactactgatcttc
aagggttggttattttatatactggacgactatgcgtaccatagttcgtggtcagatatc
gtaaagtggaatattgagtcgtgtggtggtgaagttaccaatgatcttgaactggctacg
atagttgtagctgtgaaagattgcttttcgcaactgtcacttcaggcagtccggaataat
ataggagccaggataacaggtagtaatgatgttcagcccattcctaaaattgtgacaagc
gagtgggttgaggcttgcatggaagcgcaatacttagtagatgaggatgaatatgctgcc
atatag
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