Ashbya gossypii (Eremothecium gossypii): AGOS_ADR338C
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Entry
AGOS_ADR338C CDS
T00167
Name
(RefSeq) ADR338Cp
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ago
Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03022
Basal transcription factors
ago03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AGOS_ADR338C
09124 Replication and repair
03420 Nucleotide excision repair
AGOS_ADR338C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ago03021
]
AGOS_ADR338C
03400 DNA repair and recombination proteins [BR:
ago03400
]
AGOS_ADR338C
Transcription machinery [BR:
ago03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AGOS_ADR338C
DNA repair and recombination proteins [BR:
ago03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AGOS_ADR338C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
4620600
NCBI-ProteinID:
NP_984434
UniProt:
Q759D9
LinkDB
All DBs
Position
IV:complement(1303851..1305260)
Genome browser
AA seq
469 aa
AA seq
DB search
MDSRSASESDEDAITAVSGKRNREGVRVNPQASGKKQVRIADEGEEEQDEQEDEEEDVDE
GAEGKRRKKKKLNKNLQGVNGGYAWEDEIQRSWDLVKVDNEGNMAALVASIIEARKKRSA
NKDITPYQRGIIRTMILVIDCSEAMLERDLRPNRHAMTVQYAIDFVHNFFDQNPISQLCI
VAMRNGMAQLVSQVSGNPQEHIEALKAVRKQEPKGNPSLQNALEMARGLLLHVPSHCTRE
VLIVFGALSSTDPGDIHQTIASLANEHIRTRVIGLSAQVAICKELCKQTNYGDNSYYGVI
LNETHFKDLFAEAVVPLPVNKMNKGFTLVKMGFPTRIFEDTPSFCTCHSRLVHGGYFCPN
CKSKVCSLPIVCPCCDLMLILSTHLARSYHHLMPLKVFQELPVDIQFPTENCFSCQKKFP
RLRNYKTQDLLTSSRYRCENCKCDFCIDCDVFVHEILHNCPGCESKAVL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggattccagaagtgccagtgagtcagacgaagatgcaattactgcggtttcaggaaag
cggaatcgggaaggcgtgcgggtcaaccctcaggccagcgggaagaagcaggtgcgaata
gctgatgaaggcgaggaagaacaagacgagcaggaggacgaagaggaggacgtggacgag
ggcgcagagggcaagcggagaaagaagaagaagctgaacaaaaacctgcagggtgtgaac
ggcggatatgcatgggaagacgaaatccagcgaagctgggacctggttaaggtggacaac
gaggggaacatggccgcgctggtggcgagcatcattgaggcgcgcaaaaagcggtctgca
aacaaggacatcaccccctaccagcgcggcatcatccggacgatgatcctagtgatcgac
tgcagcgaggcgatgctcgagcgggacctgcggcccaaccggcacgctatgacggtgcag
tatgcgattgactttgtgcacaacttcttcgaccaaaacccaatttcccagctgtgtatt
gttgccatgcggaacggtatggcgcagctggtcagccaggtcagcgggaacccgcaagag
catatcgaggcgctcaaggccgtccgcaagcaggagccaaagggcaacccgtctttgcag
aacgcgttggagatggctcgcggactgctcctgcacgtgccgtctcactgcacgcgcgag
gtgctgatagtgtttggcgcgctgtcgtccacggaccccggcgacattcaccagaccatt
gcctcgcttgccaacgagcacatccgcacccgcgtcatcggcctctccgcgcaggtcgcc
atctgcaaggagctctgcaagcagacaaactacggtgacaactcctactacggtgtgatt
ctgaacgagacacacttcaaagacctttttgccgaagccgtcgtaccgctacccgtcaac
aagatgaacaagggcttcacccttgtaaaaatggggttccccacgcgcatattcgaagac
acgccctcgttctgcacatgccactcccgtctcgtgcacggaggctatttctgtccgaac
tgcaagagcaaggtgtgctccctgcccattgtctgcccatgctgcgacctaatgctcatt
ctctcgacccaccttgcgcgctcataccaccatctaatgccactcaaggtcttccaagaa
cttcccgttgacatacagtttccaaccgagaactgtttcagctgtcagaagaagtttccg
aggctgcggaactacaagacgcaagatctactcacaagctcgcgttaccgctgtgaaaac
tgcaagtgtgatttttgcatagattgcgacgtttttgtgcacgaaattctacacaactgc
ccaggatgcgagtccaaggctgtcttgtag
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