Agarivorans sp. B2Z047: LQZ07_16180
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Entry
LQZ07_16180 CDS
T08685
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
agq
Agarivorans sp. B2Z047
Pathway
agq00521
Streptomycin biosynthesis
agq00523
Polyketide sugar unit biosynthesis
agq00541
O-Antigen nucleotide sugar biosynthesis
agq01100
Metabolic pathways
agq01110
Biosynthesis of secondary metabolites
agq01250
Biosynthesis of nucleotide sugars
Module
agq_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
agq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LQZ07_16180 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LQZ07_16180 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LQZ07_16180 (rfbC)
Enzymes [BR:
agq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LQZ07_16180 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UQN41307
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All DBs
Position
complement(3549055..3549600)
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AA seq
181 aa
AA seq
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MKFIDTSIPDVKIIEPTVFGDDRGFFMETFRQSLFEEHCTKQPLVQDNHSKSKQGILRGL
HYQTQQTQGKLVRVVSGEVFDVAVDIRANSPTYGQWVGLFLSAENKRQLWVPAGFAHGFY
VTSEEAEFVYKCTDYYAPEFDVSIKWDDPSIGIDWPLVNGQPPLISDKDANGLPLGEAPK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatagacacatcgatacccgacgtaaaaatcattgagccaaccgtgtttggt
gatgaccgtggtttttttatggaaacctttcgccaaagtttatttgaagagcactgtaca
aagcagccgttggtgcaagacaaccactctaagtctaaacaggggattttacgaggtttg
cattatcaaacgcagcaaacccaagggaaattggtaagagtggtaagtggagaggtgttt
gacgtcgccgtagacatccgcgctaattcgcccacttatgggcagtgggttgggctgttt
ctatctgccgagaataaacgccaactatgggtacctgctggctttgctcacggcttttat
gtaacgagtgaagaggccgaatttgtatacaagtgtaccgactattacgcgccagagttt
gatgtatcgataaaatgggatgaccctagcatcggtattgattggccattagtgaacgga
caacctcctttaatatcagataaagacgcaaatggattaccacttggcgaagcgccaaaa
ctctag
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