Actinomadura graeca: AGRA3207_005727
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Entry
AGRA3207_005727 CDS
T07938
Name
(GenBank) sugar-binding protein
Organism
agra
Actinomadura graeca
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DddA-like
PT-HINT
RHS_repeat
DUF6443
Hom_end_hint
Hint
Motif
Other DBs
NCBI-ProteinID:
QXJ24408
LinkDB
All DBs
Position
6493947..6500792
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AA seq
2281 aa
AA seq
DB search
MLFSSASNPSRRRLFLGMRRSLRHVSAGVSVVMAAGLATAPAAHADPPHSERPKVADHER
TVGGKDLKVRPRTPDPATRSVARPNASWPKPGSTDVTVTGGRAKVAVLDRAAARRAGVDG
LVFTLTPDGKAAAERVGVRVDYSAFAQAFGGSYGSRLRLVRLPVCALTTPAEPECQTSTP
VATTNNGETRTLTADVATPTVLAAVAAPEGSQGDFKATKLEASATWAVTGNTGDFTWTYP
MRVPPVPGDLVPAVELGYSAQSVDGRTGNTNNQPSWAGEGFEFSPGFIERRYKACEDDGV
PNGPGGKPPGDLCWGYENAVVTWNGKGGELIKAADGTWRLKDDDGTRFERLTDTKTGNGD
DDGEYWKVTTTDGTQYFFGRNHLPGSDSGGAATNSAWTVPVFGDDDGEPCHKASGFADSW
CQQAWRWNLDMVLDSNDNAIAYHYQPETNHYGRNLNPADATPYTRGGHLTSAEYGLRGNN
MVGAPAARVNFEVSERCIPTTAFDCAPAKISTNPGQWADVPWDMNCEAKTPCKDGHGSTS
PTFWSRKRLTKVTTQINKGAGWPYRNVDSWTLDHRWGADTDERDLLAAGIQHTGLAGATT
ADDLALPKVTFNHVAKANRVDQAGDGVPPYTRYRVSKIFDESGGQIDIGYTGQECFRTAP
PTPQSNTKRCFPSIWHPPGQTTPYTDWFNKYVVTSVAEKDRTGHAPDMATLYDYIGGAAW
HYDDDDGLTREKFKTWSQWRGYGQIRIRTGSPDGPSTQADAYYLRGMHGDRAGPDGGTKT
VTVPDGEGGTHTDAEGLEGFTLKTVNYTAPGGAVHDKTVNTAWRHQTATRTRSWGTVTAN
AVKVGNSRTWTAMDGGAWRETKIVSEFETDFTKVGRVKQVDDLGDVALPADDRCTRTGYA
DNVARWMVSYQSRAETVSVACATEPDRSKHVIADARAFYDGGGFGDAPTKGNVTQTERIA
EHDGSRATYSTVAKTSFDTFGRTLTVTNAADQTTTTRYTNTNGLTSRTTVMSPPPSPGAA
GLSATEDLDPAWGSPIAKTDNNNTDGAGRPLRTDLAYDALGRLQKVWLPNRSKTAGDIPN
LEHAYRIADGQIAAVTTKTLADTGPQRVAITLYDGHLRPRQVQAPGPGGRLITDTFYDDR
GQVAKTYAPYSAAGAPETALFGVDAPGNVETQSHFSYDGLGRQTVERLLTGNGTTQEKWR
TTIGYGGNWITVDPPQGGTPTAQITDARGQVTERRQYRGDAPSGAYDATTYGYDPAGRLT
TVKDPSGKTWANTFDLRGRRTRSTDPDTGTSTLTYDVLDQIESTTDARNKTIFHAYDALG
RRTQTREGSAAGRLLASWTYDTAVRGKGKPATATRHGDNGDYVSAVPSYDVLGRPESTAM
TIPVSEGPLAGTYTHAQTYNLDGTVREDVLPAAGGLPQETLAHAYDDYQRPTRLTSAQAT
YVGHTDYTPTGKPKLIELGTGGKRTWNTLTYQYGTQRLAGSSTSRENVAGYDRNAAYTYD
DEGNILGISDVSNAGTDTQCFKYDHLRRMTDAWAVATPDCPQSPSTSAGPAPYRMHYTYK
TDGSRAKEEFYNQAGTQISTRDYRYQGDPDVGGSVKGHMLGKVDQTGANPITGPETNDET
YAYDAAGNPTTRTVGTTTQSLEWNSEGDLDKITQGDATVRFVYDADGNRLIRKDLTGATL
YLPGTELRATNGSATAVGTRYYDHNGQTVAMRDASGVRYLTGDHQGTSQVAVNATDQKSI
TRRFTPFGQARGTIEEETWPDQKGFLGGTKDPTGLTHLGAREYDPNNGRFISADPVVDTG
DPQLLNAYAYGGNNPVTSSDPDGLFPLPPCVRNPITCGHKTPTPKERVTNLPTQIVGLVE
GAMQAALDDLYAAANYARNSAHDLKKSTAAFIGMGMNPAGPERPSAGDPPKQHKAPRFRI
PRVPVDRDSPSYRAGRTVGYVVGVPLPGLPAAKLPRGIRWLSKILKLCRRSSFVPGTAVV
MADGTRRPINEVKKGDKVLAADSTTGRAEVQTVQDTITSKGKKNLVQITVDGRFAHWLPK
TGERRTAAAPAALPNAGSQGTVIATDEHPFWVAGDTGAWVRARDLEPGMWLRTSAGTYVQ
VTAVKARTSPDQRVHNLTVSNLSTYYVSAGETPVLVHNCTTLESVARGLGTRGRDAPTRG
QVVNITDDGVTAIGQPVRSGGSAISGDIDDFLMGSSEIANPLTGPHPSITHVETKIAWFM
RQRGIQSADVVINNADGPCTGVFSCSNAVEAILPNGSSMTVWFPDGSGGMSSVRLTGRAA
R
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
gtgctgttcagttctgcgtccaatccgtcccgcaggcggctgttcctgggtatgcggcgg
tcactgcgacatgtatctgccggtgtgagcgtcgtcatggcggccggattggcgacggct
ccggcggcgcatgccgacccgccgcattccgaacgtccgaaggtcgccgaccacgagcgc
accgtcggtggcaaggatctgaaggtccgtccgcgcacgcccgatccggcgacccggtcg
gttgcgcggcccaatgcgtcctggccgaagcccggcagcaccgacgtcacagtgacgggc
gggcgggcgaaggtcgccgtgctggaccgcgcggcggcccggcgcgcgggtgtcgacggg
ctggtgttcaccctcacccccgacgggaaggcggcggctgagcgggtgggtgtccgggtc
gactactccgccttcgcccaggcgttcggcggctcctacggcagcaggctccggttggtc
cggctccccgtgtgcgcgctgaccactccggccgaacccgaatgccagacctcgacaccg
gtcgccaccaccaacaacggcgagaccaggacattgacagcggacgtggcgacccccacc
gtcctcgccgccgtcgcggcacccgagggctcccagggcgacttcaaggccaccaagctg
gaagcgtcggcaacgtgggcggtcaccggcaacaccggcgacttcacctggacctacccg
atgcgcgtgccgcccgttcccggggatctcgtcccagcggtggaactcggatattcggcg
cagagtgtcgatggccgtacgggcaacaccaacaaccaaccgtcgtgggcgggggagggg
ttcgagttctcgcccggattcatcgagcgccgttacaaggcgtgtgaggacgacggcgtc
cccaacgggccgggcggaaagccaccgggggacctgtgctggggatatgagaacgcggtc
gtcacctggaacggcaagggcggtgagctgatcaaggccgccgacggcacctggcgcctc
aaagacgacgacggcaccagattcgagcggctcaccgacaccaagaccggaaacggcgac
gacgacggcgagtactggaaggtcaccaccaccgacggcacccagtacttcttcggccgc
aaccacctgcccggcagcgattcgggcggcgcggccaccaactcggcctggacggtcccg
gtgttcggcgacgacgacggcgaaccgtgccacaaggcgtccggattcgccgactcctgg
tgccagcaggcatggcgctggaacctggacatggtcctcgattccaacgacaacgccatc
gcctaccactaccagcccgagaccaaccactacggccgcaacctcaaccccgccgacgcc
accccctacacccgcggcggccacctcaccagcgccgagtacggcctgcgcggcaacaac
atggtcggcgccccggcggcccgggtgaacttcgaggtctccgagcgctgcatccccacc
accgcgttcgactgcgccccggccaagatctccaccaatcccggccagtgggccgatgtc
ccctgggacatgaactgcgaggccaagaccccgtgcaaggacgggcacggctccacctcg
cccaccttttggtcccgcaagcgcctgaccaaggtcaccacccagatcaacaagggcgcc
ggctggccctaccgcaacgtcgactcctggaccctggaccacagatggggcgccgacacc
gacgaacgtgacctgctcgccgccggcatccagcacaccggcctcgccggcgccaccacc
gccgacgacctcgcactgcccaaggtcaccttcaaccacgtcgccaaggccaaccgcgtc
gaccaggcgggtgacggcgtcccgccctacacccgctaccgcgtcagcaagatcttcgac
gagtccggcggccagatcgacatcggctacaccggccaggaatgctttcgcaccgcaccc
ccgacaccacagagcaacaccaaacgctgcttcccctcgatctggcacccgcccggccag
acgacgccctataccgactggttcaacaaatacgtcgtcacgtccgtggccgagaaggac
cgcaccggccacgcgcccgacatggccaccctctacgactacatcggcggcgcggcatgg
cactacgacgacgatgacgggctgacacgcgagaagttcaagacctggtcccaatggcgc
ggttacgggcagatccgcatcaggaccggaagcccggatggcccgtccacccaggccgac
gcctactacctgcgcggcatgcacggcgaccgcgccggcccggacggcgggaccaagacc
gtcaccgtccccgacggcgaaggcggcacccacaccgacgccgagggactggagggcttc
accctcaagaccgtcaactacaccgcccccggcggcgcggtgcacgacaagaccgtcaac
accgcttggcgccaccagaccgcgacccgtacccgctcctgggggaccgtcaccgccaac
gccgtcaaggtggggaactcacgcacctggaccgcgatggacggcggcgcctggcgcgag
accaagatcgtcagcgagttcgagaccgacttcaccaaggtcggccgggtgaagcaggtc
gacgacctcggagacgtcgccctccccgccgacgacaggtgcacccgcaccggctacgcc
gacaacgtcgccagatggatggtctcctaccagtcccgggccgaaaccgtgtcggtcgcc
tgtgccaccgaacccgatcggtccaagcacgtcatcgccgatgcgcgggccttctacgac
ggcggaggcttcggtgacgcgcccacaaagggcaatgtcacgcagaccgagaggatcgcc
gagcacgacgggagccgggccacctacagcacggtcgccaagaccagcttcgacaccttc
gggcgcaccctcacggttaccaacgccgccgaccagaccaccaccacccgatacaccaac
accaacgggctgaccagcaggaccaccgtcatgtcgccgcccccgtccccgggcgccgcg
gggctgtcggccactgaggacctcgacccggcctggggatcgccgatcgcgaagaccgac
aacaacaacaccgacggcgcgggcaggccattgcgcaccgatctggcgtacgacgcgctc
ggccggctccagaaggtctggctccccaaccgctccaagacggccggcgacatccccaac
cttgagcacgcgtaccggatcgccgacggccagatcgccgccgtcaccaccaagaccctc
gccgacaccggcccccagcgcgtcgccatcaccctgtacgacgggcatctgcgtccgcgc
caggtccaggcgcccggccccgggggccgcctgatcaccgacaccttctacgacgaccgc
ggccaggtcgccaagacgtacgcgccctactccgcggcgggcgcccccgagaccgcgttg
ttcggcgtcgacgcacccggcaacgtcgagacccagagccacttctcctacgacggcctc
ggccgccagacggtggaacgcctcctcacgggcaacggcaccacccaggagaaatggcgc
accaccatcggctacggcgggaactggatcacggttgacccgccgcagggcggcaccccc
accgcccagatcaccgacgcccgcggccaggtcaccgaacgccgccagtaccggggtgac
gccccgtccggcgcctacgacgcgacgacctacggctacgacccggccgggcgcctgacc
acggtgaaggacccgtccggcaagacctgggccaacaccttcgacctccggggccgccgg
acgaggagcaccgaccccgacacgggcaccagcaccctcacctacgacgtcctcgaccag
atcgagtccaccaccgacgcccgcaacaagacgatcttccacgcctacgacgcgctcggg
cgcaggacgcagacgcgcgagggctcggcggccgggaggctgctcgcgtcgtggacctac
gacaccgccgtccgcggcaagggcaagccggcgaccgccacccggcacggcgacaacggc
gactacgtcagcgccgtgccctcctacgacgtcctgggccgtccggaatccaccgcgatg
accatccccgtgtccgaggggccgctggccggtacctacacccacgcccagacctacaac
ctcgacggcaccgtccgcgaggacgtcctcccggcggcgggcgggctccctcaggagaca
ctcgcccacgcctacgacgactatcagcgtccgacgcgcctgaccagcgcccaggccacc
tacgtcgggcacaccgactacacgcccacgggcaagcccaagctgatcgagctcgggaca
ggtgggaaacggacctggaacaccctcacctaccagtacggcacccagcgcctcgccggg
tcgagcaccagccgcgagaacgtcgcgggctacgaccgcaacgccgcctacacctatgac
gacgagggcaacatcctgggcatctccgacgtctccaacgccggaaccgacacccagtgc
ttcaagtacgaccacctgcgccgcatgaccgacgcctgggccgtcgcgacgccggactgc
ccccagtcgccctcgacgtccgcgggccccgccccgtaccggatgcactacacctacaag
accgacggcagccgcgccaaggaggagttctacaaccaggccggcacccagatctccacc
cgcgactaccgctaccagggcgaccccgacgtcggcggcagcgtcaagggccacatgctc
ggcaaggtcgaccagaccggagccaaccccatcaccgggcccgagaccaacgacgagacc
tacgcttacgacgccgcgggaaaccccacgacccgcaccgtgggaaccaccacccagtcc
ctggagtggaacagcgaaggcgacctcgacaagatcacccagggggacgccaccgtccgg
ttcgtctacgacgccgacgggaaccgcctgatccgcaaggacctcaccggcgccaccctc
tacctgcccggcaccgaactccgcgcgaccaacggctcggcgaccgcggtcggcacccgc
tactacgaccacaacggccagaccgtcgccatgcgcgacgcctccggagtgcggtacctg
accggggaccaccaggggacctcccaagtcgcggtcaatgccaccgaccagaagtccatc
actcgccggttcaccccattcggacaagcccgcggcaccatcgaggaagagacctggccc
gaccagaagggcttcctgggcggcaccaaggacccgaccggcctcacccacctgggcgcc
cgggagtacgaccccaacaacggccgcttcatctccgccgaccccgtcgtcgacacgggc
gacccgcaattgctgaacgcctatgcctacggcggcaacaacccggtcacttccagcgac
cccgacggcctcttcccactcccgccctgcgtccgcaaccccatcacctgcggccacaag
accccgacgccgaaggagcgcgtcaccaacctcccgacgcagatcgtgggcctggtggaa
ggagccatgcaggccgcgctcgacgacctctacgcggccgcgaactacgccaggaactcc
gcccacgacctcaagaagagcaccgcggccttcatagggatgggaatgaaccccgccggc
ccggaaaggccgagcgcaggagacccgcccaagcagcacaaggcccccagattccggatc
ccccgcgtgccggtcgaccgtgacagcccgtcctacagagccggccgcaccgtcggctac
gtcgtcggggttcctcttccgggcctccccgccgccaagctccctcgcggcatcagatgg
ctgtccaagatcctcaagctctgccgccgcagcagtttcgtgcccggaaccgccgtcgtg
atggcggacgggaccagaaggcccatcaacgaggtcaagaagggcgacaaggttctcgcg
gccgactccacgaccggcagggccgaggtccagaccgtccaggacaccatcacgagcaag
ggcaagaagaacctcgtacagatcactgtcgacggccgctttgcgcactggctccccaag
accggcgaacggcgaacggcggccgcccccgccgccctcccgaatgcgggatcacagggc
acggtgatcgccaccgacgagcatccgttctgggtggccggtgacaccggcgcctgggtc
cgggcccgtgacctcgaaccggggatgtggctgcgcaccagcgctggcacctacgtccag
gtcaccgccgtcaaggcccgtacgagccccgaccaacgagtccacaacctcaccgtctcg
aacctcagtacgtactatgtgtcggccggggagacgccggttctggtacacaactgcaca
acgctcgaaagcgttgcccggggccttgggacgcgcggaagggatgccccgaccaggggg
caggtcgtcaatataaccgacgatggcgtcacggcgatcggccagccggtcaggagtggt
ggaagcgccatatcgggagacatcgatgactttctcatggggtcttctgaaatcgcgaat
ccgttgaccggacctcatccatcgatcacccacgtggagacgaagatcgcatggttcatg
cgccagcgcggtatccagtccgccgacgtcgtgatcaataatgccgacggtccgtgcacc
ggagtgttctcgtgtagtaatgcagtagaggcgatacttcccaatggctcgtccatgaca
gtatggtttcccgatgggtcgggcgggatgtcttccgtccgcttgacgggcagagcggcc
cgttaa
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