Anthonomus grandis grandis (boll weevil): 126737309
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Entry
126737309 CDS
T08911
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03013
Nucleocytoplasmic transport
agrg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126737309
09122 Translation
03013 Nucleocytoplasmic transport
126737309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agrg03019
]
126737309
03041 Spliceosome [BR:
agrg03041
]
126737309
Messenger RNA biogenesis [BR:
agrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126737309
Spliceosome [BR:
agrg03041
]
Complex C
Other components
EJC/TREX
126737309
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126737309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Organ_specific
Motif
Other DBs
NCBI-GeneID:
126737309
NCBI-ProteinID:
XP_050298108
EnsemblRapid:
ENSAGSG00005005060
LinkDB
All DBs
Position
6:complement(13311727..13345572)
Genome browser
AA seq
648 aa
AA seq
DB search
MPPTNTYMDFDHIRREFKETLKVAFKNDNITLLENKVASFKNTELDIKTPLDQAFRDLLL
DLLTEEVQVTVLKMFVDLSIKTCRMGLTSPTMPVVLLGDIFDTLTLDICQDLFSFVEDNV
HIWKEELFFAGCKNNLLRLCNDLLRRLSRTTATVFCGKILLFLARFFPFSERSGLNIVSE
FNLENTTEYGTDTSDDIVAEIVTGDQKHVIDFSFYCKFWQLQDFFRNPNQCYDKVQWKVF
CSHSMNILSTFHGIKLDYLKDSEQTSNVGYFAKYLTSQKLLDLQLHDVSFRRSVLLQFLI
VFQYLTSSVKFKSDSFELKPDQKEWIQTSTEKVYSLLRETPPDGANFAKIIKNILKREEL
WNSWKNDGCPEIKKFLPQNDPVEIPKAKKTEPLVGDLIKAARNEGKFYMGSKELTKLWNK
NPINLEACKGKDFLPTMDEFFGEAIAQFESGVPVKDEDNLLKDGHFGWRALRLLARRSPY
FFSLNTQNHPLPKYLELMVHKMAHEKPGRNDENSQEATNEQEIEENILTEAEDQNTEDFH
KPSEEFVEENNTSRQETKNISDERLLLIIEKIAPDWEKLGTKLGYKSDEIEWFKNENPIR
FDQARHMMKLWFEDDEDANLDNLLYILEGLEMNEAAEAVRSELNTTES
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccacctactaatacgtacatggattttgatcatatccgtcgtgaattcaaggaaacc
cttaaggttgcctttaagaacgataatatcaccttattggaaaacaaagttgcttctttt
aaaaacaccgagttggatattaagacccctctggaccaggcgtttagagatctattgctc
gacttgctcactgaagaagttcaagttacagttttaaaaatgtttgtagatctttccata
aaaacttgcaggatgggtttgacttcacctacaatgccagtggttcttttaggagatatt
tttgatacacttaccttggatatatgccaagatctatttagttttgtggaagacaatgtt
cacatatggaaagaggaactattttttgcaggatgtaaaaataatctgctccgactgtgt
aatgatttactcaggagattgtctcgtacaactgcaacagttttttgcgggaaaatccta
ctcttcttagccagattttttcctttctctgaaagatctggtctcaatattgtaagtgag
tttaacttggaaaacactacagagtatggcactgacactagtgatgatattgtggcagaa
attgtcactggagatcaaaagcatgtcatagatttctcattttattgtaaattttggcag
ctgcaagatttttttaggaatcctaaccagtgttatgataaggttcagtggaaagtgttt
tgctctcattccatgaatattttaagcacatttcatggtattaaattagactatttaaaa
gattcagagcagacatccaatgttggttattttgcaaaatacctcactagccagaaactt
ttggatttacaattgcatgatgttagcttcagaagatcagttcttttgcagttcctaata
gttttccagtatttaacttcttctgttaagtttaagtcagatagttttgaactaaaacca
gaccagaaggagtggattcaaacctccacagagaaagtttatagtctgttaagggaaacc
cctccagatggagctaatttcgctaaaatcattaaaaacattctgaagagagaagaattg
tggaactcttggaaaaatgatggttgtccagaaattaaaaaattcttaccacaaaatgac
ccagtggaaattcctaaagccaagaaaactgaacctttggtgggagatctcataaaagca
gcaagaaacgaaggaaaattctatatgggaagcaaagaacttacaaaactctggaataaa
aaccctatcaatctggaagcatgcaaaggcaaagactttctcccgactatggatgagttt
tttggagaggcaattgcccaattcgaatcgggtgtaccagttaaggatgaggataatttg
ctaaaagatggccattttggatggagagctctaagactacttgcaagacgaagtccatat
tttttctcgcttaacacccaaaaccacccccttcccaagtatctggagctgatggtacac
aaaatggcccacgaaaaaccaggtagaaacgacgagaatagccaggaagccacaaatgag
caagaaattgaagaaaatatcctcacggaagcggaagatcagaatactgaagatttccac
aagcctagtgaagagtttgtagaagaaaacaacacctcgaggcaagaaaccaagaacatt
agtgacgaaagactgttacttattatagagaagattgcgcccgattgggaaaagttgggc
actaaattaggttataaatccgatgagatcgaatggttcaaaaacgaaaatccgataagg
ttcgatcaagcgaggcacatgatgaaactctggttcgaagacgacgaggacgccaatttg
gataatcttctctacattttagagggtctcgaaatgaatgaggccgcagaggctgtgcgg
agcgaattaaacacaacagagagttaa
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