Anthonomus grandis grandis (boll weevil): 126743372
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Entry
126743372 CDS
T08911
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
agrg
Anthonomus grandis grandis (boll weevil)
Pathway
agrg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
agrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
126743372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agrg03400
]
126743372
Enzymes [BR:
agrg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
126743372
DNA repair and recombination proteins [BR:
agrg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
126743372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
BRCT
DNA_ligase_IV
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
126743372
NCBI-ProteinID:
XP_050306380
LinkDB
All DBs
Position
12:complement(15413426..15578679)
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AA seq
850 aa
AA seq
DB search
MEFKMICSIFEDIRKAKTPVDKGKILEEYFRNIRGTQPKANIFALMRLMVPKVDRERSSY
SLKESKIARVLVKLVALPPGNDKNILTKSYLMSGQASDFGDVVYSVIRKYFSNAKTTLTV
NQLNDSLDKLANRSNEAEAEELLTNLFKKCAPEDSKWIIRIILKDLKLGIDGNRILRSYH
KDAADYLASNNNLRKVCEDLYDLNANMHEFDIKVFEAFRPMLSKRVDAAVFKKHFADGSL
YYTENKFDGERFQLHMDNGMFKYFSRNGFDYTNIYGSTVNEGIFTPKLQNVFQPFVKRII
LDGEMMLWNTITNKYGSKGMDLDVKKLKDNGKYQPCFCVYDIILLNDKILTNKPLKDRLS
LLERAFKEQIPGTIILSKVKIVSSRQEIIDTLNAAVEVEDEGIIVKEPNSIYKYSDRNSG
WYKMKLEYFQDTMNDLDLILMGGQYASSTSNQLNSFIVGVKSGTTNEGKPIFLSFGKVSS
GLNDIELDMINDKLKTVGKFFDNNHSSSLQFGKEIPDYYIEPENSLVFTVRASELTRANN
LAYRTSYSLRFPRVVKVRMDKPVVDCLDINELLELTNKNKAVIKLNKRNIELEEILQIKT
RQVKKKPISVIHFEDSRKVTDLFEGYTFYVFNGSALSSRDKTEAVIGKAGGNVRYKLDNN
IDIVLVGTYDSKAKKLASKKSHFDVIDVSWLYRVIQEGNLLPYKTKEIYCLGTNIKNCLS
DEVDRYGDSFTENATIETLKHSFEIMENLNETPCFTGMLKIIGRDFGYYVAYFDRFFEIN
NKESKVIYDSLEDELEFRYYSGKVCDEICRETNVIIINDSERKDFIETFLISIDRSDIDI
QNRSFIYEYE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaaaatgatttgcagcatatttgaagacattagaaaggccaaaactccagta
gataagggaaagattttagaagaatattttagaaacatccgtggaactcaaccaaaggcg
aacattttcgcactgatgcggcttatggtgccaaaagttgaccgtgaaagaagctcctac
agtctaaaggaatccaaaatagcaagagttttggttaaattagttgctttaccaccaggc
aatgacaaaaatatattaactaaatcatatttaatgtctggacaggccagtgattttggg
gacgtggtttattcagtaataaggaagtattttagcaatgctaagaccacattaaccgta
aatcaactaaatgacagtcttgataaactagcaaatagaagcaatgaagctgaagctgaa
gaacttttaaccaacttgtttaaaaaatgcgctccagaagactcaaaatggattataaga
attatattaaaagacctaaagttgggtattgatggtaatagaattttaagaagttaccat
aaagatgccgccgattatcttgcttctaacaacaatttaaggaaagtgtgtgaagacctt
tatgacttaaatgcaaacatgcacgagtttgatattaaggtatttgaagcttttcgacca
atgttgtcgaagagagtggacgctgctgtttttaaaaaacattttgcagacggttcattg
tattatactgaaaataaatttgatggtgaacgatttcagttacatatggacaatggaatg
tttaagtatttttcaagaaatggatttgactatacgaacatttacgggtcaaccgtgaat
gagggaatatttacacctaaattacaaaatgtatttcaaccatttgtaaaaagaatcatt
ttagatggtgaaatgatgctctggaacactattactaataaatatggatctaagggaatg
gacttggatgtcaagaagcttaaagataatggtaaatatcagccatgcttctgtgtttat
gatataattttgctcaatgataagattttgactaacaagcctttgaaagatagattaagt
ttactagagcgggcctttaaagaacaaattccagggacaataattttaagcaaagtaaaa
attgttagttcccgtcaagaaattattgatacattaaatgcggccgttgaagtggaagat
gagggcataatagttaaagaaccaaattcaatttataaatacagcgatcgcaatagtggc
tggtataaaatgaagttggagtatttccaagatactatgaatgacttggatttaattttg
atgggagggcagtacgcgagttccacctccaatcagttaaattcttttatagtaggtgtt
aagtcgggtactacgaatgaaggcaaaccaatttttttatcttttggcaaagtaagtagt
ggtttaaatgacattgaattagatatgataaatgataagctaaagactgttggcaaattt
tttgataataatcatagcagttctttacaatttggaaaagagatcccggactattatata
gaaccagaaaactcactggtttttactgttagagcgtcagagcttacacgggccaataat
ttggcttacagaacttcttattctctcagatttcctagagtggtgaaagttcgaatggac
aaaccagtcgtagattgtctggatataaatgaacttttggagctgactaataaaaataaa
gctgtgataaaacttaataaaagaaatatagaattggaagaaatccttcaaattaaaact
agacaagtaaaaaagaaacccataagcgtaattcatttcgaggattccagaaaggttact
gacttatttgaaggatacacgttttacgtttttaatggttcagcattatcatcgagagat
aaaacggaggctgttataggcaaagcaggaggaaatgttcgctataagcttgataataat
atagatatcgtcttggtaggcacttatgattcaaaggctaaaaaacttgccagtaaaaaa
agtcattttgatgtaatagacgtttcttggttatatagagtgattcaagagggaaatcta
ttaccttataaaactaaagaaatatattgcctaggcacaaatatcaaaaactgtttaagt
gatgaagtggataggtatggggatagttttaccgagaatgcaactatagaaactttaaag
cacagttttgaaataatggaaaacctgaatgaaactccttgttttacaggaatgcttaaa
ataataggaagagattttggatattacgtggcctatttcgatagatttttcgagataaat
aataaggaatctaaagtgatttacgattctttagaagacgaacttgaatttcgctactat
tctgggaaagtttgtgatgaaatttgtagggaaactaatgttattattatcaatgatagt
gagagaaaggactttattgaaacatttctaattagcattgatagaagtgatatagacatt
caaaatagaagttttatttacgaatatgagtga
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