Aphis gossypii (cotton aphid): 114126974
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Entry
114126974 CDS
T05869
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03022
Basal transcription factors
ags03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114126974
09124 Replication and repair
03420 Nucleotide excision repair
114126974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ags03021
]
114126974
03400 DNA repair and recombination proteins [BR:
ags03400
]
114126974
Transcription machinery [BR:
ags03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114126974
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114126974
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
114126974
NCBI-ProteinID:
XP_027846844
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDDTEVKEYRWEGGYEKTWEEVKEDEGGNVEWSVKEIIEKSKRLLATRQPNVRLGMMRHL
FVIIDSSNSMVEKDLKPTRQLCTYKLLQDFIQDYFDQNPISQLGLITTRNSSAERISELS
GNRKYHLEELKKTFGGFNYCNGLMSVQNSLEIAFSVMKMLPSHTSREILIIGSSLSSCDP
GEINTTIDMLKTNNIRVSMIHLAAEVRMFRHLCDETKGKHNVIVDDVHFKHVLWSLVEPV
PLPNSVDASCVKMGFPQELEQKPPFTTCSCHLAEGGKLNAKGFFCPQCNSKYCELPVECK
CCGLILVSSLHLARSLHHLVPIKPFIKIELEEGSSAYCYGCRKRIKVPAENVYFCESCKK
HYCDGCDIYVHNTLHVCPGCAVKRDEKR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgatactgaagtaaaagaatatcgctgggaaggtggttatgaaaaaacatgggaa
gaagtgaaagaagatgaaggaggaaatgttgaatggtcagttaaagagatcattgaaaaa
tctaagcgattactggcaactcgacagccaaatgtccgcttgggcatgatgcgacatttg
tttgttattatagatagttccaattcaatggttgaaaaggatttaaaacctactagacaa
ttgtgtacttacaaattgcttcaagatttcattcaagattattttgatcaaaatccaatt
agtcaacttggtctgataactacaaggaattcatctgcagagcgtatatctgaattgtct
ggcaatagaaaatatcatctcgaagaattgaaaaaaacttttggaggttttaattattgc
aatggattgatgtctgtacaaaactctttagaaattgcattttcagttatgaaaatgttg
ccctctcatactagtagagaaatacttattattggatctagtttgagctcgtgcgatcca
ggtgaaataaatactactatagatatgcttaaaacaaataatatcagagtttcaatgata
cacttagctgccgaagtacggatgtttcgacacttgtgtgatgaaactaaaggtaaacat
aatgtgattgtagatgatgtacattttaaacacgttctttggtcgttagtggaacctgtt
ccccttccaaattcagttgatgcatcatgtgtgaaaatgggctttcctcaagagttagaa
caaaaaccaccatttaccacatgttcatgtcatttagcagagggtggcaaattaaacgct
aaaggatttttttgtccacaatgtaacagcaaatattgtgaattacccgtggagtgtaaa
tgttgtggcctcatactcgtgtcttctttacatcttgctaggtcattacatcatttggtt
cctattaaaccgtttataaaaattgagcttgaagaaggttctagtgcctattgctatgga
tgcagaaaaagaataaaggtccctgctgaaaatgtatacttttgtgaatcgtgtaaaaaa
cattactgtgatggctgtgacatttatgtgcataatacattacatgtgtgtccaggctgt
gctgttaaacgagatgaaaaaagataa
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