Aphis gossypii (cotton aphid): 114128706
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Entry
114128706 CDS
T05869
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ags
Aphis gossypii (cotton aphid)
Pathway
ags03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ags00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
114128706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ags03400
]
114128706
Enzymes [BR:
ags01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
114128706
DNA repair and recombination proteins [BR:
ags03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
114128706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
BRCT
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
114128706
NCBI-ProteinID:
XP_027849080
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MLILIIFVRVMASTISKPCNKIPFELFCRVCEDICNAKNDKKILILEKFISKCRGSIEKS
ENLNIEDTFYPALRLLLPGSDKQRGAYGVKETALGKLYVKILCLAKDSQDAQKLLNFRVP
KVSGSTAGDFAETLYWVIRSRFEDNGSMTIADVNQLLDEIALKHATNESREVEQILQSAL
FKLSANEQKWLVRLLLKDMRLGIAHTKILKAYHCDANDLYDVCNDLTKVCKMLNNPSVIL
HEISVNLFEPFCPMLSERCEITDDSKIMKTIKNDEVFVDIKLDGERFQLHWSREKNLFKY
FSRRGNDYTDTYGCNDTIGILSPVLAKQFKPDVKNCILDGEMMCYNTKYKSFSTKAMNID
VKKLRIGNTHQPCFCVFDVLYYNDLVITNRPLEERLEILNTIFDPLEGIFVHTMRHKARK
VDLMKHLNDAIDNFEEGIVVKDPLSIYKPNSRNAGWYKIKPEYADGALIELDLLIIGGYY
GEGKRRGVVSHFLMGLLEKDGESFKYSAISRVSSGFSKEELADLSRKLSPHWKRFNPKDL
PPNIEWGKEKPDLWIEPESSVIVQVKATEIMTSNIFKSKITLRFPRIEKVRYDKPWHDCM
TVQEFETIIKQTEGKLYISCTDETNSSGKIKKSRVSVSVDKKFQGPDLRDVNCINNMFED
KEFCILNDSETLSKSEIEKKILEYGGRVVQNPGNDTFCVLANNIKHIRANAIKLSGKHSI
ISTKWILSCFNDNEFLNWTPENVLFLSKEHQLLMDEKFDQYGDSYTELATVETLRQAMDR
VELDDDLINTEVDAFLDFKNELFNEDQCFKIFEKYQVYFDDLNLDNLPVRNFHTNSVLEM
LIFKFNGGTVCKNIDSNTTHVVIHSSCKNNANKYQTMKKDRNQAFEIVDENWITQKIKW
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgttaattttaatcatatttgttagagtcatggcttctacaatcagtaaaccttgcaac
aaaataccatttgaattattttgtcgtgtatgcgaagacatttgtaatgctaaaaatgat
aagaaaatcctcattctagaaaaattcattagtaaatgccgagggtcaattgagaaaagt
gaaaacttaaatatagaagacacattttatccggcattgaggttactgttacctggatca
gacaaacaaagaggagcgtatggtgttaaagaaactgctttgggaaagttatatgtaaaa
atactatgccttgcaaaagacagtcaagatgctcaaaaacttttgaatttcagggtgcca
aaagtttctgggtctacagctggagactttgctgaaactctgtattgggttataagaagt
cgatttgaagataatggttcaatgactattgctgatgttaatcaattattagatgaaata
gccttgaaacatgctacaaatgaatcaagagaagtggaacaaattttacagtcagcacta
ttcaaactcagtgctaatgagcaaaagtggttggttcgtctattattaaaagatatgcgc
ttaggtattgctcatacaaaaatattaaaagcgtatcattgtgatgccaacgatttatat
gatgtttgcaatgatttaacaaaagtatgtaaaatgctaaataatccatcagtgattttg
catgagatatctgttaatttatttgaacccttttgtccaatgctaagcgaacgttgtgaa
attactgatgacagtaaaataatgaagacaattaaaaatgatgaagtatttgttgacatt
aaattggacggtgaaagatttcaacttcattggtccagagaaaaaaacctttttaaatac
ttttccagaagaggtaatgattatacagatacatacggttgtaatgacactattggtatt
ctgagtccagtattagctaaacaatttaaaccagatgtaaaaaattgcattttagatggt
gagatgatgtgttataacactaaatacaagtcattttccacaaaagccatgaatattgat
gttaaaaaattaagaatagggaatacacatcaaccatgtttttgtgtatttgatgttctg
tattataacgatcttgtaataacaaaccgtccattagaagaacggttagaaattttaaat
accatatttgatccattagaaggaatttttgtacataccatgagacataaagcaagaaaa
gttgatttaatgaaacatcttaatgatgcaattgataactttgaggaaggtattgtagtc
aaagatccattatcaatttataagccaaactcacgaaatgcaggatggtataaaattaaa
ccagaatatgctgatggtgcactcattgaattagatttattaattattggtggatactat
ggcgaaggtaaaagacgtggtgttgtgagccattttcttatgggtcttctggaaaaagat
ggtgaatcatttaaatattctgctatcagtcgagtcagttcaggattttcaaaagaagaa
ctagctgatttgtcaagaaaattatctcctcactggaaaagatttaatcctaaagatttg
ccaccaaatattgaatggggtaaagaaaaaccagatctttggattgaacctgaatcatca
gttattgtacaggtaaaggcaacagaaattatgacaagtaacatttttaaaagtaaaata
acattacgtttcccaagaattgaaaaagttcgttatgacaaaccatggcatgactgtatg
actgttcaggaatttgagactataatcaagcaaacagagggaaaattatatatttcctgt
actgatgaaactaattcttcaggtaaaattaaaaaatcccgtgtgtcggtatctgttgat
aaaaaattccaaggtccagatttaagagatgtcaattgtattaataatatgtttgaagat
aaagaattttgtatcctcaacgatagtgaaacattgagcaagagtgaaattgaaaaaaaa
attcttgaatatggtggtcgagtcgtacaaaaccctggcaatgataccttttgtgttctt
gctaacaatattaagcatataagggcaaatgcaataaaattatctggcaaacatagtata
ataagcacaaaatggatactgtcatgttttaatgataatgaatttcttaattggactcct
gaaaacgttttgtttttatccaaggagcaccagcttctaatggatgaaaaatttgatcag
tatggtgacagttatacagaattagcgactgttgaaacattacgccaagcaatggaccgt
gttgaactagatgatgatttaatcaacacagaagttgatgcttttttggatttcaaaaat
gaactttttaatgaagatcaatgtttcaaaatttttgaaaaataccaagtttattttgat
gatttaaatttagataatttgcctgtcagaaatttccacacaaactcagtattagaaatg
ctaatatttaaatttaatggaggcacagtctgcaaaaatattgatagcaatactactcat
gttgtaattcattcaagttgtaaaaataacgctaataagtatcaaactatgaaaaaagat
cggaaccaagcatttgaaattgtcgatgagaattggattacacagaaaataaaatggtag
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