Agarivorans sp. TSD2052: M0C34_05525
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Entry
M0C34_05525 CDS
T08089
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agz03400
]
M0C34_05525
DNA repair and recombination proteins [BR:
agz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
M0C34_05525
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
zinc_ribbon_2
AAA
DZR
AAA_30
AAA_16
UPF0547
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
UPW19742
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Position
1229498..1231225
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AA seq
575 aa
AA seq
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MLQLRDYQQTSVESVLTHFRQSDDAAVLVLPTGAGKSIVIAELARLAKHPILVLAHVKEL
VEQNHSKYQAYGFQSGIFAAGLGLKQNQFSVTFASVQSLSRNLEQFAGYYSLVVIDECHR
VSDESDSQYQVIIEHLKQQNPQLKVLGLTATPYRLDKGWIYQQHYHGYVRGSDKAWFKKC
IFELPLRHLISQGYLTQPVVVDAPAARYQFDELPSQYNEAQLDQFLSGCPRVTQAICKQL
LHLAEERRGVMVFAATVNHAKEIAHYLPDEQTAVITANTPNLQRDQLIEQFKQQQLKFLV
NVSVLTTGFDAPHVDLIAILRRTASVSLYQQIAGRGLRLFEGKSDCLIVDYAGNNYDLYQ
PEIGETKPNPNSTLVQVSCPQCEFANMFWGMTDKDGDIIEHYGRRCQGLVEDATNPTLQV
QCLYRYKYKQCSQCNAENDIAARQCHSCGFQLIDPDNQLKDALQLKDRTVLRCSGMSASS
EGNKLKLIYHDEDGAELSESFNFDYAKAKQQFNTVFARRVEGTKRDVSSASQAEQLIGGI
VAPDFVIGKKKKHYWVIEHRIFDYQGNYRKANQQF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttacaactgcgagattatcagcaaacatcggtggaatcggtattaacccattttcgc
caaagtgatgacgcagcagtgttggttttacccactggggccgggaaaagcatcgttatc
gccgagctagcccgtttagcaaaacatcctatcttggtgctcgcgcatgtcaaagagctg
gtggaacaaaaccacagtaagtaccaagcttatggttttcaatctggtatttttgcagcg
ggtttagggcttaagcaaaaccagttttcagttacctttgctagtgtgcaatcgctaagc
agaaacctcgaacaatttgcgggctattattccttagtggtgattgatgagtgtcaccgt
gtgagtgacgagagtgacagccaataccaagttattattgaacatttaaaacagcaaaac
ccccagcttaaagtgttgggtttaaccgccaccccttatcggttagataaaggctggatt
taccaacagcattaccatggttatgtacgaggcagtgacaaagcttggtttaaaaagtgt
atttttgagctgcccttacggcatttaattagtcaaggctatcttactcaaccggtcgtg
gttgatgcacctgccgcacgttatcagtttgatgaactaccaagccaatacaatgaagcg
caactagaccagtttttatcgggttgcccacgggtgacacaagccatttgtaaacagtta
ttgcatttggctgaagagcgccgcggggtaatggtatttgctgctacggttaatcatgct
aaagaaatcgctcattatttgcctgatgagcaaacggcggtgattactgctaatacacca
aacctgcagcgtgaccagttaattgagcagtttaaacagcagcagcttaagtttttggtt
aacgtatcggtgctcacaactggctttgacgcaccgcatgtcgatctgattgccatttta
cgccgcactgcatcggttagtttatatcagcaaattgcaggccgcggtttgcgtttgttt
gaaggcaaaagcgattgtctaattgttgattatgcgggcaataattacgatttataccag
cccgagatcggtgaaactaaacccaacccaaatagcaccttagtacaggtgagttgccca
caatgtgagtttgccaatatgttctgggggatgaccgacaaagacggcgacattattgag
cactatggccgccgttgccaaggcttagtcgaagacgccacaaacccaactcttcaagtg
cagtgtttatatcgttacaaatacaaacagtgctcgcaatgtaatgctgagaatgacata
gcagcacggcaatgccatagctgtggttttcagctaatcgaccccgataatcagcttaaa
gatgccttacagctcaaagatcgaactgtgcttaggtgcagtggcatgtctgctagcagt
gaggggaataagctaaagcttatttatcacgatgaagatggcgcagagctaagtgaatcc
tttaactttgattacgccaaagccaagcaacagtttaatactgtttttgctcgacgcgtc
gagggaactaagcgtgatgtgagtagcgcttcacaagcagagcagttaattggcggtata
gttgccccagactttgtcatcggcaaaaagaaaaagcattactgggttattgaacaccgt
atttttgactaccagggcaactatagaaaggctaatcagcaattttaa
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