Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_3532
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Entry
AHA_3532 CDS
T00424
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aha03016
]
AHA_3532
Enzymes [BR:
aha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AHA_3532
Transfer RNA biogenesis [BR:
aha03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AHA_3532
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABK39375
UniProt:
A0KP01
LinkDB
All DBs
Position
3974322..3974861
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AA seq
179 aa
AA seq
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MLTRMAKLFFALPAEALAPDLVAWRDQLPWPGQPVPAANLHLTLAFLGEADPLTTTRLMA
AVERQHCPPLTIALNETGWFGRAKAAWVGPTEWPNELTVLARALRRHGEKLGLGNGEQGY
RPHVTLSRKASEPPALLPAPDFVLQADRFCLYQSLSTPDGVRYEPLACWPLRAREKMAS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgctcacccgaatggccaaactcttctttgccctgcccgccgaggcgctggcacccgat
ctcgtcgcctggcgcgaccagctgccctggccgggtcaaccggtgcccgccgccaatctc
cacctgacgctggccttcctcggcgaagcggatccgctcaccaccacccgcctgatggcc
gccgtcgagcgccagcactgcccgccgctcaccatagcgctcaatgaaaccggctggttc
ggccgcgccaaggccgcctgggtcggcccgacggagtggcccaacgagctcaccgtgctg
gccagggcgctgcgtcgccacggcgagaagctggggcttggcaacggcgagcagggctat
cgcccccacgtcaccctgtcgcgcaaggcgagcgaaccgccggcgctgctgcccgccccc
gatttcgtgctgcaggccgaccgcttctgcctctatcaatccctctccaccccggacggg
gtgcgctacgagcccctcgcctgctggccgctgcgggccagagagaaaatggcatcctga
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