Aeromonas hydrophila YL17: AI20_08085
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Entry
AI20_08085 CDS
T03186
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ahd
Aeromonas hydrophila YL17
Pathway
ahd03030
DNA replication
ahd03430
Mismatch repair
ahd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AI20_08085
03430 Mismatch repair
AI20_08085
03440 Homologous recombination
AI20_08085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahd03032
]
AI20_08085
03400 DNA repair and recombination proteins [BR:
ahd03400
]
AI20_08085
Enzymes [BR:
ahd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AI20_08085
DNA replication proteins [BR:
ahd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AI20_08085
DNA repair and recombination proteins [BR:
ahd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AI20_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_tau_5
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_30
AAA_5
AAA_14
AAA_18
AAA_2
ResIII
nSTAND3
AAA_19
Rad17
TsaE
VapE-like_dom
TniB
Mg_chelatase
SKI
DUF815
Zeta_toxin
PIF1
PatG_D
AAA_24
DNA_pol3_delta
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AHV35147
LinkDB
All DBs
Position
complement(3580060..3582615)
Genome browser
AA seq
851 aa
AA seq
DB search
MSYQVLARKWRPHTFEQVVGQHHVLTALTNALDQGRLHHAYLLSGTRGVGKTTIARILAK
SLNCEQGISSHPCGVCDTCREIDQGNFVDLLEIDAASRTKVEDTRELLDNVQYRPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPPYVKFLLATTDPQKLPITILSRCLQFHLKSLDQ
TQIAKQLEWVLDQEGQPFEPRALLALAKAADGSMRDALSLTDQALAHGNGSVRTDSVLAM
LGTLDHRHLYQLLEAVLRQDAPATMAKITEIATLGPDFDQLHAELEGLLHRIAMAQLLPA
TVQEQGADADALLQLAQAMSPEEVQLCYQIVLGGRKDLPWAPDGRTALEMTCLRMLAFSP
RREVLHPASLTALPPALGGLPAAGARSSAPALGKPEGVEPPPATGMMPQAPSADAATSPA
PVTSSAPAAPAEHQGTQEAGQAAQPHPQVADMAEPEGGAELDPLFAEQAELLREAEQMGY
EAAPESIVPAAQPAAAEPASSVQSVAPTNVADEVADSGEGSVSSTVASMQSLLGKRNLLR
SRLRGEPSGNAAPARATPVKPMAAAKPAPMAPAAAMPSSAPHSPSVPRVQTAAQAVQSGY
DELPPLDAYEESGSDYEEYLNQGFNDAFASAPLPERTTQVVQPAPAARPQADDLPPWDLD
GSASRQAVAAPSAPAAVATPPEATISEPAASVMETIDWNELESDNQPQGSEEAARLIPSS
LLANCGDHWAELIARTGVGGRLRQLAINSVMEQQGDRVLLTLKPEQRHLVSDRARADLAE
IIGPELGLAVQVDVTLGVVPERETPLEIEHRLYLGVREQVTRDLEQDPNVQFLQQRFGAM
LHHDSIEPLSN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcgcgtaaatggcgcccccatacgtttgaacaagtggtaggc
cagcatcatgtgctgaccgccttgaccaacgccctggatcagggacggctgcatcacgcc
tatctgctgagcggtactcgcggagtcggcaagaccaccatcgcgcgcatcctggccaag
agcctcaactgcgagcaggggatcagcagccatccgtgcggcgtgtgcgacacctgccgc
gagatcgatcagggcaacttcgtcgatctgctggagatagacgcggcgtcacgcaccaag
gtggaagatacccgcgagctgctcgacaacgtccagtaccgaccggcccgtggccgtttc
aaggtctatctcatcgacgaagtgcacatgttgtcgcgccacagcttcaacgcgctgctg
aaaaccctggaagagccgcccccctatgtcaagttcctgctggccaccacggatccgcag
aagctgcccatcaccatcctctcgcgctgcctgcagtttcatctgaagagtctggatcag
acccagatcgccaagcagctcgaatgggtgctggatcaggagggacaacccttcgagccg
cgcgccctgttggccctggccaaggcggcggacggcagcatgcgcgatgccctgagcctc
accgatcaggcgctggcccacggcaatggcagcgtgcgcaccgacagcgtgctggccatg
ctggggaccctggatcaccgccatctgtatcaactgctggaagctgtgctgcgccaggat
gcacccgccaccatggccaagatcaccgagatagcgaccctgggccccgactttgatcag
ctccatgccgagctggaagggctgctccatcgcatcgccatggcgcagctgttgcccgcc
accgtgcaggagcagggggcggatgccgatgccctgctgcagctggcccaggccatgagc
ccggaagaggtgcagctctgctatcagatcgtgctgggtggccgcaaggatctgccatgg
gcccccgatggccgcaccgcactggaaatgacctgcctgcggatgctggccttctcgccc
cggcgcgaggtgttgcaccccgccagcctgacggcgctgcctccggcactcggtggcctg
cccgccgctggcgccagaagctcggcccccgctttgggaaagcccgagggggttgagcca
cccccggccaccggcatgatgccgcaggctccgtcagccgacgccgcgacttcgcccgcg
ccggtcacttcttctgcaccagctgcaccagccgagcaccaagggacgcaggaggccgga
caggccgcccagcctcacccacaggtggctgatatggcggagccggaaggcggcgccgag
ctggatccgctgtttgccgagcaggcggagctgctgcgcgaggccgagcagatgggctat
gaggctgcgcccgagtcgatcgtacccgcggctcagcctgccgcagccgagcccgcgtcc
tccgtacaaagcgtcgccccaacgaatgtggctgacgaagtggctgacagcggggagggg
agtgtctcttcaacggtggccagcatgcagagcctgctgggcaagcgcaatctgctgcga
agccgcctgcgcggcgagccgagcggcaatgcggcgccagcccgggcgacaccggtcaag
ccgatggcggccgccaaaccggcaccgatggcaccggctgcggccatgccgtcctcggcg
ccccactccccgagtgtcccccgggtgcagactgctgcccaggcggtccagtcaggttac
gatgagttgccgccgctcgatgcctatgaagagagcggcagcgactacgaagagtatctg
aatcaaggtttcaacgatgcgttcgccagcgcccccttgccggagcgaactacccaggtg
gtgcagccagcgcccgccgcgcgtccccaggcggatgatctgccgccctgggatctggat
ggcagtgccagccggcaggcggttgctgcaccgagtgccccggccgccgttgcaacgccc
cctgaggcgaccatcagcgagccagccgcctcggtcatggaaaccatcgactggaacgag
ctggagagcgacaaccagccgcagggaagcgaggaggcggccagattgatcccctcttcg
ctgctggccaattgcggcgaccattgggccgaactgattgcccgcaccggtgtgggcggc
cgcctgcgccagctggccatcaattcggtgatggagcagcagggcgacagggtgctgctg
accctcaaacccgagcagcgccatctggtgagcgacagggcgcgcgccgatctggccgag
atcatcggccccgagctggggctggcggtacaggtggacgtcaccctgggggtagtgcca
gagcgggaaaccccgctcgagattgagcaccgcctctatctcggggtgcgggaacaggtc
acccgggatctggagcaggatcccaacgtgcaattcttgcagcagcgatttggcgccatg
ctgcaccacgacagcatagagccgctgagcaactga
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