Arachis hypogaea (peanut): 112726233
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Entry
112726233 CDS
T07294
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112726233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112726233
03036 Chromosome and associated proteins [BR:
ahf03036
]
112726233
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112726233
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112726233
mRNA degradation factors
5'-3' decay
Decapping complex
112726233
Chromosome and associated proteins [BR:
ahf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112726233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
DUF5382_N
TFIIA
Motif
Other DBs
NCBI-GeneID:
112726233
NCBI-ProteinID:
XP_025631329
LinkDB
All DBs
Position
Arahy.12:complement(1344975..1350492)
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AA seq
515 aa
AA seq
DB search
MNNNNNYYNRARYPPPGIGGGGLGRGGGGGGPGFNQNSPFQPRPNYQQHQQQHQQLQQQH
QQYVQRQMVQQQQQQQQQQQQQQWLRRAQMGAADSNVVDEVEKTVQSEAIDPSSQDWKAR
LKVPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSD
ILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQV
MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSPEF
QPSIQQLIHFLPSHRQILMFSATFPVTVKDFKDRYLQKPYVINLMDELTLKGITQYYAFV
EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRV
FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN
LITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaacaacaactactacaacagagcgaggtacccaccacctgggatcggtggc
ggtggtcttggacgaggaggaggaggaggaggccctggtttcaatcaaaactcaccgttt
cagccaaggcctaattaccagcaacaccagcaacagcaccaacaactacaacagcagcat
cagcaatatgttcagaggcagatggtgcagcaacaacaacaacagcagcagcagcaacaa
caacagcaatggctgagaagggcgcagatgggtgctgctgactccaacgtcgtggatgag
gttgagaagaccgtgcagtctgaagccattgacccgagttctcaagattggaaggcaagg
ctaaaggttccaccacctgatacgcgttataagacagaggatgtgacagcaactaaagga
aatgaatttgaggattattttttgaagcgagagctgctcatgggaatatatgagaagggt
tttgaaaggccttctcctatccaagaagaaagcattccaattgctcttactggtagtgac
attcttgcaagggctaaaaatgggacaggcaaaacagctgcattttgcattcctgcattg
gaaaaaattgaccaggataacaatgttattcaagttgttatattggttccaacaagggag
ttagctttgcaaacatctcaagtatgcaaagaacttggaaagcacttgaaaattcaagtg
atggttacaactggtggtactagcctgaaagatgatatcatgcgcttatatcaaccagtt
catttactagttgggactcctggaaggatattagatctcgctaagaagggtgtttgcgtt
ctgaaagattgcgcaatgcttgttatggatgaggccgataagcttttgtccccagaattc
cagccttctatacagcagctgattcattttcttccttcacaccgacaaattctgatgttt
tcagcaacatttcctgttactgtaaaggatttcaaagataggtatcttcaaaagccatat
gtcattaaccttatggatgagctaactttgaagggtatcacacagtattatgcatttgtc
gaagagagacagaaggttcactgcctgaatacactgttttctaagttgcaaataaaccag
tcaatcatcttttgcaattcggtgaatcgtgttgaactccttgcaaaaaaaatcaccgag
cttggatattcgtgtttctatattcacgcaaagatgttgcaagatcatcgtaatagagtg
tttcatgacttccgcaatggcgcatgccgtaatcttgtttgtactgatctttttactagg
ggaatagacattcaagcagtcaatgttgttattaattttgattttcccaagaattcagaa
acttatctccacagggtcggtcgctcagggaggtttgggcatcttggtttagcagttaac
ttgatcacttatgaggatcgctttaatttatataggattgaacaagaacttggaactgaa
ataaagcaaattccaccacatattgaccaggcaatttattgccggtga
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