Arachis hypogaea (peanut): 112754319
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Entry
112754319 CDS
T07294
Name
(RefSeq) LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112754319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ahf03041
]
112754319
Enzymes [BR:
ahf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112754319
Spliceosome [BR:
ahf03041
]
Complex C
Other components
Step II factors
112754319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ABC_tran
AAA_30
nSTAND3
T2SSE
Flavi_DEAD
AAA_16
TsaE
PhoH
Sigma54_activ_2
AAA_33
Motif
Other DBs
NCBI-GeneID:
112754319
NCBI-ProteinID:
XP_029149395
LinkDB
All DBs
Position
Arahy.16:complement(778787..781598)
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AA seq
761 aa
AA seq
DB search
MDTSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPES
GERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQA
VHDNQVLVVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAATSVAKRVAEEFGCR
LGEEVGYAIRFEDSTGPDTVIKYMTEGMLLREILADENLSRYSVIMLDEAHERTINTDVL
FGLLKQLVQCRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYSKQPESDYL
DAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALP
SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT
PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTIPEIQRINLAMTTLNMKAMGI
NDLLSFDFMDPPSSQAIISAMEQLYSLGALDEEGXLTKLGRKMAEFPLDPPLSKMLLASV
DLGCSDEILTIISMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNF
SGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAAR
KDPQEGYRTLVENQPVYIHPSSSLFQRQPSWVIYHELVMTTKEYMREVIVIDPKWLVELA
PRFFKVSDPTKMSKRKRQERIEPLYDRYQEPNSWRLSKRRA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatacatctcctgtcaagattttcaaaaatccagagggttctcttggtcgtgctgct
gccctccagtctgcacttataaaggagcgtagagaagtacgagaacagcagcagcgcacc
atgcttgattctattccaaaggatctcaatcgtccttgggaagaccctatgccagagtct
ggtgaaaggcatcttgctcaggagcttaggggtgttggtttgtcagcctatgatatgcca
gaatggaagaaggatgcttatgggaagaccattacttttgggcaaaggtcaaagctttct
attcaagaacagaggcagagtctcccaatttacaagttaaaaaaagaattgattcaggct
gtccatgataatcaggtgttggtggtaattggtgaaacaggctcaggcaaaactactcag
atcacacagtatcttgctgaagcaggttacaccacaagaggtaaaattggatgcactcaa
cctcgtagggtggctgcaacgtcagttgcaaagagagtggcagaagagtttggatgtcga
ttgggagaagaagttggttatgccattcggtttgaagattctacgggaccagatactgta
atcaagtacatgaccgaaggtatgcttcttagggaaatactggctgatgagaatctgtca
cggtattctgtcataatgcttgatgaagcccatgaaaggaccattaatactgatgttctt
tttggactgcttaagcagctagtgcagtgtagacctgagttgcgattgattgtcacatct
gccactctggatgcagagaagttctcaggatatttctttaactgtaacatctttacaata
cccgggagaactttccctgtggagattctttatagtaagcagccagaaagtgattactta
gatgcagctttaatcactgtcctacagatccacttgactgaacctgaaggagacattctt
ctcttcttgactggccaagaggagattgattttgcttgtcaatctctctacgaaagaatg
aagggattaggtaagaatgttccagaactgataatattacctgtttatagtgcccttcct
agtgaaatgcagtctaggatatttgaccctgctcctcccgggaaaaggaaagtggttgtg
gcaactaacattgctgaggcttctttgactattgatgggatattttacgttattgatcct
gggtttgcaaagcaaaatgtttataacccaaaacaaggacttgattcattggtgataact
ccgatatcacaagcttcagccaaacaaagagcaggacgtgcagggcgtactggacctgga
aaatgctatcgcctatatactgagagcgcatataggaatgagatgcctcccaccacgatt
cctgagattcaaaggataaatcttgcaatgactactctcaacatgaaagctatgggaata
aatgatcttctgtcctttgattttatggatccaccatcatcccaagctattatttcagcc
atggaacagctctatagtcttggagcattggatgaagagggcnctttaaccaaattgggg
aggaaaatggcagaatttcccttggatccaccattgtctaagatgttacttgccagtgtg
gaccttggatgtagtgatgagatattgacgataatttccatgattcagactggcaatatt
ttttacaggcctagggaaaagcaagcccaagcagatcagaagagggcaaagtttttccag
cctgaaggtgaccatctcacactgcttgctgtttatgaggcttggaaagccaagaatttt
tcgggaccatggtgttttgagaactttgttcaatctcgatcattgaggagagcacaggat
gtcaggaaacagcttctcaccatcatggataagtataaattggatgttgtaagtgctgga
aaaaactttaccaagatcagaaaggcgatcactgcaggattctttttccatgcagcaagg
aaggatccccaggaaggctacagaacccttgttgagaaccagcctgtatatatccatcca
agttcatctttgttccagagacaacctagttgggtcatctaccatgaacttgttatgact
actaaggaatatatgcgtgaggtcatagtgatagatcctaaatggcttgttgaattggcc
ccaagattcttcaaagtatcagatcctacaaagatgagcaagcgaaagcgtcaagagcgg
attgaaccactctatgacagatatcaggagccaaattcatggcgtttgagtaaacgccgt
gcttga
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