Arachis hypogaea (peanut): 112776531
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Entry
112776531 CDS
T07294
Name
(RefSeq) polyadenylation and cleavage factor homolog 4
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112776531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahf03021
]
112776531
03019 Messenger RNA biogenesis [BR:
ahf03019
]
112776531
Transcription machinery [BR:
ahf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112776531
Messenger RNA biogenesis [BR:
ahf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
112776531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Motif
Other DBs
NCBI-GeneID:
112776531
NCBI-ProteinID:
XP_025676515
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All DBs
Position
Arahy.19:complement(5067266..5069906)
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AA seq
322 aa
AA seq
DB search
MYSENLIVSAENPRPFAFQQHLSSSSSTTNSANAKPMSNEIAQMPPPSTLGCRFNAMLKL
RDDELRATAAHVPPPSTEEIVQLYEMLLSELTSNQKLIINDLTFIAVHQREHARGIADAI
CARILKVPAEQKLPSLYLLDSIVKNFGEEYVGYFALRLPEVFCEAYRQVQPYLHPAMRHL
FGTWSEVFPPSALRKIEAELQLSQVVNNSQSSNMNPLRASESPSPSHGIHVNPKYLQQLE
RSTVDSTSGKKWCGLFVGDDCVQEELLEKAVPGDDDGERKMNFAWRVDKMEADIRNLKFM
TQVLGFGLLVVVVFVGMVLLKR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtactctgaaaatctgatagtgtccgctgaaaaccctagacccttcgcgtttcagcaa
catctgtcttcttcttcgtctactactaattcggccaacgcgaaacccatgagcaatgag
atcgcacagatgcctcccccttccactctcggttgcaggttcaatgctatgctcaagctg
cgcgacgacgagctcagggccaccgccgctcacgtgccccctccgtctacggaagaaatc
gttcagctgtacgagatgctgctgtcagagctcacgtccaatcagaagctcattatcaac
gatctcaccttcatcgctgtgcaccagagggagcatgccaggggcatcgccgacgctatc
tgcgctcggattctcaaggtgcctgcagagcaaaagcttccttcactctatctcttggac
agtatagtgaagaactttggagaggaatatgttggatactttgcattacgcctgcccgaa
gttttctgtgaggcatacaggcaggttcagccttatttgcaccctgctatgcgccatctc
tttggcacctggtcagaagtctttccaccgtctgccttacgcaagattgaagctgagttg
caactttctcaagtagttaataatagtcaatcgtccaacatgaatcccctcagagcatct
gaatctcctagtccaagtcatggcatacatgtaaatccaaagtacctgcagcagttggag
cgctcaactgtggatagtacaagtgggaaaaaatggtgtggcttattcgtcggggatgat
tgtgtgcaagaggagctgcttgaaaaagctgttccaggagatgatgatggtgaaaggaaa
atgaactttgcatggcgggtggacaagatggaagcagacattagaaatctgaaattcatg
actcaagttcttgggtttgggttgttggtagttgtagtttttgtaggaatggtgctctta
aagcgttga
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