Arachis hypogaea (peanut): 112796628
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Entry
112796628 CDS
T07294
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ahf
Arachis hypogaea (peanut)
Pathway
ahf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ahf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112796628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahf03400
]
112796628
Enzymes [BR:
ahf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
112796628
DNA repair and recombination proteins [BR:
ahf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
112796628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
BRCT
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
T_Ag_DNA_bind
Motif
Other DBs
NCBI-GeneID:
112796628
NCBI-ProteinID:
XP_025694966
LinkDB
All DBs
Position
Arahy.04:32642266..32662368
Genome browser
AA seq
1167 aa
AA seq
DB search
MATEQTKFSVMCSLFNWTQRAKSPAKKRAKFRKFLDSFCADRNFFPAIRLVLPNLDRERG
SYGLKESVLAISLIDALGMSRDSEDALRLINWRKGGAKTGANAGNFALVATEVLQRRQGT
ASGGLTIKEVNDLLDQLAASENRAEKTQVLSTFIQKTNAQEMKWIIMIVLKDLKLGISEK
SIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANAAEAW
KKLHGKEVVVECKFDGDRIQIHKNGTEIHFFSRNFLDHSEYAHAMSEIIQQNILVDRCIL
DGEMLVWDSSLNRFAEFGSNQEIAKAARDGLDSDRQLCYVAFDILYFGDTSVIHQTLKER
HEILRKVVRPLKGRLEILVPNGGLNSHCSSGEPCWSFIAHNVDEVEKFFKETIENRDEGI
VIKDLGSKWEPSDRSGKWLKLKPEYIQAGTDLDVLIIGGYYGSGRRGGEVAQFLVGLAER
PSPNTHPKRFISFCRVGTGLSDDELDALVTKLKPYFRKYEYPKKRPPSFYQVTNHSKERP
DVWVDSPEKSIILSITSDIRTIESEVFAAPYSLRFPRIDRVRYDKAWYECLDVQSFIELV
QSSNGTTQRDTETKQGGKSNRIRSSIRGEKKNMSIVPSHLTQTDVSSIKGDSRIFSNMMF
YFVNVPPSHSLESLHKMIAENGGVFSMNLNNSVTHRVAAESKGFKFEAAKRHGDIIHYSW
ILDCCSQKKLVPLQPKYFLFLSEVTRKKLQEEIDEFSDSYYMYIDLGEFKQLLNTINRSE
DISTIDHYSKKYCPKDEWSVFIGCSIYFHTAIPSVKGDWKVLLQLALRRFKVEVLMGGGR
VTDKLTCATHLVVLSVPGYDAEFDEIQRCFTSVDRRFLQSKRLHIIKSHWFEDCLDNNKR
LPEESYSLRPSAIEESTSENGENDILEAHFGGDNVQDQNVPSEKENRQRSAKAAHEHSLA
TVSHENVGPRKRGRPAGRGVKNVKMAGNKAQRARPRTVRKRAKISEYESDKSDSHDNEPE
EQEDDTGEASFDIYNRHLEPQEVEQQANVQVAETEESSEPNRAVHDLRNSSESERMYVPE
IKMADRTNDQNSELAKEIENRADPMLFDKIPSLATAKKVEDTKHCDLKEERPAAAAESSS
TNTAEPTITKKKKVSYKDVANDLLKDW
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagcaaaccaagttcagcgttatgtgcagcctcttcaactggacgcagcgt
gccaagtcgccggccaagaagcgcgcaaagttccgcaagttcctcgactcattctgcgcc
gaccgcaacttcttccctgccattcgccttgtcctcccaaacctcgaccgcgagcgcggc
tcctacggcctcaaggagtcagtcctcgccatttccctcatcgacgccctcggcatgtct
cgcgactccgaagacgcccttcgcctcattaattggcgcaagggcggcgccaagaccggc
gccaatgccggcaatttcgccctcgtcgccaccgaggtactgcagcgcaggcaaggtact
gcttcgggtggattgacgataaaggaggtaaatgacttgcttgatcagttggctgctagt
gaaaacagggccgagaagactcaggttctttctacctttatccaaaagacaaatgcacag
gaaatgaagtggattatcatgatagtcctcaaagatctgaagctaggaattagtgaaaaa
agcatttttcatgaattccatcctgatgctgaagacttatttaatgttacatgtgactta
aaattagtgtgtgaaaaactaagggatcggaatcagcgtcataagcgacaggatattgaa
gttggaaaagctgtgcgtcctcagctagctaagagagttgctaatgcagctgaagcatgg
aagaagcttcatgggaaggaagtggttgtcgagtgcaaatttgatggtgaccgcattcaa
attcacaaaaatggaacagagatacatttcttctcgaggaacttccttgatcattcagaa
tatgcacatgcaatgtcagaaatcatacagcaaaacattttggtagataggtgcatactt
gatggtgaaatgttggtttgggacagttccttgaatcgttttgctgagtttggctcaaat
caggaaatagccaaggcagcaagggatggacttgacagtgacagacagttatgctatgtt
gcatttgatatcctttattttggagatactagtgtaattcaccaaactttgaaggaacga
catgagattctccgtaaagttgtgaggccattgaaggggcgccttgaaattttagtacct
aatggtggtcttaatagtcattgctcttctggtgaaccatgttggtcattcattgctcat
aatgtggacgaagttgagaaatttttcaaagaaactatagagaacagagatgagggaata
gttatcaaagacctcggttctaaatgggagcctagtgatcgaagtggaaagtggctaaaa
ttgaagcctgagtacattcaagctggcactgatctggatgtgcttatcataggaggttat
tatggctctggacgacgtggaggggaggttgctcagttcttggtgggccttgctgagcgt
ccatccccaaatacacatcccaagcggtttatctccttctgtagagttggtactgggctt
tctgatgatgagcttgatgcgttagtaacaaaactcaaaccttacttccgaaagtatgaa
tatccgaagaagaggccgccaagtttctatcaagtaactaatcattcaaaagaaaggcct
gatgtgtgggttgatagccctgaaaaatcgattattctgtccataaccagtgatatccga
actatagaatctgaggtatttgctgcaccgtacagcctgaggtttcctcggattgacagg
gtgagatatgacaaagcttggtacgaatgccttgatgtgcaatcattcatagaactagta
cagtccagcaatggaactactcagagggatacagaaaccaagcagggtggcaaatcaaat
cgtataaggtcctccataaggggagaaaagaaaaacatgtccattgttccttctcattta
actcagactgatgtttccagtatcaagggagactctcgtatattttcaaatatgatgttt
tacttcgttaatgtgcctccatctcattctcttgagagcttgcacaaaatgattgcagag
aatgggggagttttctcaatgaacttgaataactctgtcactcatcgtgtggcggcagag
agcaaggggtttaaatttgaagctgcaaaacgtcatggtgatatcattcactacagttgg
atattagattgctgctcacaaaagaagcttgtccccttacagccaaagtacttcctcttc
ctatctgaagtaacaaggaagaagttacaagaagaaattgacgagttctctgactcttac
tacatgtatattgatcttggagagttcaaacagctcttaaacactattaatcggtcagag
gatatcagtactattgatcattacagcaaaaaatactgtccaaaggatgagtggtctgtc
tttattggatgctccatatatttccacactgcaataccatcagtgaaaggggactggaaa
gttctattgcaacttgctttgagaagattcaaggttgaagttctcatgggcggtggtaga
gttactgataaacttacttgtgcaacccatttagttgtcttgtcagttccaggatatgat
gccgaatttgatgagatacagagatgttttacttcagtggataggaggtttctccagagc
aagaggttgcatataataaaatcccattggtttgaagattgtctggacaataacaaaaga
ttaccagaagaaagttacagcttgaggccctctgcaatagaagagtcaacatctgaaaat
ggtgaaaatgacatcttagaggctcactttggtggagacaatgtacaagaccagaatgta
ccctctgaaaaggaaaatagacagagaagtgcaaaagctgctcatgaacacagtttggcc
acggtgtcccatgagaatgttggcccaaggaagagaggaagacctgcagggagaggtgtt
aaaaatgttaagatggctggcaacaaagcccaaagagcacggccacgcactgtgagaaag
cgtgcaaaaataagcgagtatgaatcggacaaaagtgattctcatgacaatgaaccagaa
gagcaggaggatgacaccggagaagcaagttttgatatttacaatagacatttggaacct
caggaggtcgagcaacaggccaatgtccaagttgctgaaacagaagaaagttctgaacca
aacagggcagtgcatgatttgaggaatagtagtgagagtgaaagaatgtatgttccagaa
ataaaaatggcagataggaccaatgaccaaaacagtgaattggctaaagaaattgaaaat
cgggctgatcccatgttatttgacaagattccgagccttgctaccgccaagaaagttgag
gacactaagcattgtgatctaaaagaagagaggccagcagcagcagcagaaagcagtagc
accaatactgcagaacctacaatcactaagaaaaagaaagttagctacaaggacgttgcc
aatgacctgctcaaagattggtag
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