Aeromonas hydrophila J-1: V469_08675
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Entry
V469_08675 CDS
T03574
Name
(GenBank) carboxylate--amine ligase
KO
K19789
DNA repair protein RadD
Organism
ahj
Aeromonas hydrophila J-1
Brite
KEGG Orthology (KO) [BR:
ahj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahj03400
]
V469_08675
DNA repair and recombination proteins [BR:
ahj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
V469_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
AAA_22
AAA_30
DZR
AAA_16
SLFN-g3_helicase
AAA
zinc_ribbon_2
Motif
Other DBs
NCBI-ProteinID:
AJE35953
LinkDB
All DBs
Position
complement(1887408..1889168)
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AA seq
586 aa
AA seq
DB search
MFVLRPYQTDAVNAVISHFRQHPDPAVVVLPTGAGKSLVIAELARKARGRVLVLAHVKEL
VEQNHAKYEAWGLKADIFAAGLARKEASAQVVFGSVQSVARNLAAFDGAFSLLIIDECHR
VSLDDDSQYHQVIEHLKTANPALKILGLTATPYRLGLGWIYRRHYHGMVKSHGERLFGDC
VFELPLRFMVKNGYLTPPRLVDAPIVHYDFSKLVARENGLFSEADLNSELKRQQRVTPHI
LSQVLEYAADRQGVMIFAATVEHAREIHGLLGARGQQAALITGETPGPERDALISAFKAR
ELKFLVNVAVLTTGFDAPHVDLIVMLRPTESVSLYQQIVGRGLRLSPGKTDCLVLDYAGN
NFNLFAPEVGEPRPHAGTEPVQVPCPACGFANTFWGKTDEDGKVIEHYGRRCQGLFEDDE
GHREECDYRFRAKICPACGSENDIAARRCQSCDQLLVDPDDKLKEALNLKDCMVIRCAGL
TLSAGRGKQGERLEVTYHDEDGLTLNEYFGFHSQGARRLFQQVFVRHHWPAPGLEPEFAT
LASVLAAESQFRHPDFVIARKAGRFWQIKEKIFDYEGRYRTANSMA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgttcgttctcagaccctatcagaccgacgccgtcaacgccgtgatcagccactttcgt
cagcacccggatcccgccgtggtggtgctgcccaccggggccggcaagagtctggtgatc
gccgaactggcccgcaaggcgcgcggccgggtgctggtgctggcccacgtcaaggagctg
gtggagcagaaccacgccaagtacgaggcgtgggggctcaaggccgacatcttcgccgcc
gggctcgctcgcaaggaggcgagcgcccaggtggtgtttggctcggtgcagtcggtagcg
cgcaatctggctgccttcgacggggcgttttcgctgctcatcatcgacgagtgccaccgg
gtctcgctcgatgacgacagccaataccatcaggtgattgagcacctcaagaccgccaat
ccggccctcaagatcctcggcctcaccgccaccccctatcggctcgggctgggctggatc
taccggcgccactaccacggcatggtcaagagccacggcgagcgactgttcggcgactgc
gtgttcgagctgccgctgcgcttcatggtcaagaacggctatctgaccccgcccaggctg
gtggatgcccccatcgtccactacgacttcagcaagctggtggcgcgggaaaacggcctg
ttcagcgaggcggatctcaacagcgagctcaagcgtcagcagcgggtcaccccccatatc
ctgagccaggtgctggagtatgcggccgaccggcagggggtgatgatcttcgccgccacc
gtcgagcatgcccgcgaaattcatggcctgctgggcgccagaggccagcaggccgccctc
atcaccggcgagacgccggggccggagcgcgatgccctcatcagtgccttcaaggcgcgc
gagctcaagtttctggtcaacgtggcggtgctcaccaccggcttcgatgccccccacgtg
gatctcatcgtgatgctgcgccccaccgagtcggtgtcgctctaccagcagatcgtgggt
cggggcctgcgcctctctcccggcaagacggactgtctggtgctcgactatgccggcaac
aacttcaacctgttcgcccccgaagtgggggaacccaggccccacgccggcaccgagccg
gtgcaggtgccctgccccgcctgcggttttgccaacaccttctggggcaagaccgacgag
gatggcaaggtgatcgagcactacggtcgccgctgtcaggggctgtttgaagatgacgag
ggccatcgcgaggagtgtgactaccgctttcgcgccaagatctgccccgcttgcggcagc
gaaaacgacatcgccgcccgccgctgccagagctgcgatcagctgctggtggaccctgac
gacaagctcaaagaggcgctcaatctcaaggactgcatggtgatccgctgcgccggtttg
acgctgagtgccgggcgtggcaaacagggggagcggctggaggtgacctatcacgatgag
gatggcctcaccctcaatgagtacttcggatttcactcccagggtgcacggcgcttgttt
caacaggtctttgtgcgtcatcattggcccgccccgggtctggaacccgagtttgccacc
ctggcgagcgtgctggcggcagaaagccagttccgccaccccgatttcgtcatcgcccgc
aaagcggggcggttctggcagataaaagagaagatttttgattatgagggtcgctatcgc
accgccaactcgatggcgtga
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