Actinoalloteichus hymeniacidonis: TL08_04305
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Entry
TL08_04305 CDS
T04472
Name
(GenBank) hypothetical protein
KO
K19720
collagen type III alpha
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
TL08_04305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ahm00536
]
TL08_04305
Glycosaminoglycan binding proteins [BR:
ahm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
TL08_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WXG100
Endonuclea_NS_2
Motif
Other DBs
NCBI-ProteinID:
AOS61691
LinkDB
All DBs
Position
complement(888832..895461)
Genome browser
AA seq
2209 aa
AA seq
DB search
MGMEIPDEVKWLIPICVGMSWPEGDETALRRLGEAWRQAASEVGGVIQQGQAAADASLAC
MEGETADAFQEMWNQFVAGDEQFLVSLQEFCEGLGASCDDSALEVEYTKYMIIASLIMLA
IQIAAMIAAAFVTFGTASAGIPVAQAATRLTVQMIFRQLIISILKSVAIEVAMSVGLDAA
IQGLQMLQGNRDGMDWGKIKDSAISGVVSGVVGGVSGVVPTGATGALSDSVGGTLADQAL
RGATRGAAEGVASTVAEGLVTGQGFTGQDLLYGATSGAVGGAVDGAQSGAEGLSAANIDT
DGGGSGADGGSGSDGGGSGSDGGSGPDGGSGPAGGLPSESGTPNSLLSATGGSPDSGGSG
LGNTSSGGSSGGSGSSSTSGSNSGSSSGGSDGGGGSDSGGTSPNSTASTTPSSSGLGDSG
PSTTSTAPDSSPSTSGGPDSLGARLDGGSDSGGSAPTAPDSGLSTQSAPLAADSGSPGGS
PSDGGGTSTGGSPPDGGRPDSAGPSTDAPASSSTTSAPQPDGPAAGPTPDSGSTTPSSSA
APDAATPDAAGSSNPSSPGGPTNPAPDAGSGNGGPGGGGSGGGAGGTPAGGTPAGGSAPG
GSSPDRSATAGPPDAPTTSNGPSAGPISAPDLDGAPDPARSGSTASAASFDAPSGAAPGG
APTSPTADSTGGPGNGGSTPGSSQSPSGPRPDQVPSGATPRPGDSAPQAPGNPGGFGPSS
PNDPAGFGPSGGVPGPTNPGPNAPHSTGGLDAAGPAGFGPTGPGATGPRPEAPPSAPLTI
SASSTGGSDAPFSGGQPGFQGGGSPSAPAAGNPAGFGGSAGGPAGGMAGGMPGSVPFGPA
PGGMGGQPGGGPGSFGPAGQPAPQPGGGQPGPGRPGPQQPGLGHPGSPPPAGPPPAGPPQ
PGHSGPPPRGLPPQNFGGPPPNQSGGPTPPQGGPGYPTQPRPAGPPMPFGPTGPGGPGGP
GGFGQPGPGPGQPGPQQLAPHQGGPGNPGQQRPFGPPGQFGPGTPPGGPNQFGPGQQGPP
QVNQPHGPRPGQFAPPPNGLGNQPGGFGNQPPGFGQQPGHPGGQQPGGFGQPPNRPGQFG
PGPAPHGGPGQSGPFGGQPDGPPRPHQQAGPPQAPPAQVPPQGGPNRPGPDGPAPQPGRT
DVPAPRSDTPPAGADRNAAPVPRGDGGADRTPPADRKPTTPESPQAPATPRTPDSASPVG
GPPADAGPGSGDPIPSSGPSDAASPTDSADSTPDTDSGLPPIEHEYPLSDGSTYETSLGA
DQLDTTDGFESSLAERLEGTGLTPEQFDEIRQRPVESYTAAEVEAIRDVRDGVETPPGEV
VQRVLTGEVAANYLQNNPVFIPDGSGGQRQIFDPTEAGGFTTRYRDVAELRSPADVIEGL
RLDYTDGGYEDRNGRPPYLPDDASIPVLRFPLDQPDNLAIPYGGTTPEGMANMGGDTRQD
PPFTGNGFPGSEQHATPEFILSPTELGEVAELWVVDRDGNESLLGAFDPDNGQWNTTPDG
DAWLAANEASRTELLAERDAAAGADPATPRPDTTPDADPTSTPDHDADSSTDPDSSPDRD
GDPGDPADSPADPRPLTTEQQAILDASTTTPAGRAFFPDEPETQRSAQTVAPDPDGRRTY
DLHGDQQNVFIGDQTLDAAGFADIVRADPDWNGEAIRLLSCDTGGLPDGFAADLARELGV
EVLAPTQMGWANADGSLFSSSGTQDADGNWTPADPPDGTWQAFQPDGTTTDFSDGPYLGD
SAAEGGPDDARARANTRSTNQVPDYVPPVMDPNVPPVPVLLGPNQRFADAVPNPEPNTWY
RVDLEFENAQGSLEIKTVGDYFVGERCADTGRPKLEYVTAAVPNESPGKSADAYFPPGGA
TGPALGAIDLLLDPEVVYNVADGHGNQRFRTDGEAEPPPAVTWDVPDAALPNEGSSDIPP
GEASEDTRSAPSPPFTVVLTEEWNPQEGSFTSGWGARPEEDRPANAQITLNRPNGDGWHA
TIFTDDAGNISRILTWAGPHENLFNPELGNRETMHFHHEHTTASDVQPRTGAPIPNVVYG
VVDPPKIGESPGDPRWLFHTDEKGNTAAASGAFDYDKSHRHARESAIQLAVGQVASKNEY
SGVMEAAGGHIFGHAAAGISERVNYMAQWAAQNATFGQHFIPTSWGEMENHLKAIAGPDL
RVDRFDFWADRNGRETPEAVHVRFQLTMGDPPVTSTHLRSFPNVPPTVP
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggagatccccgacgaggtcaagtggctcatcccgatctgtgtggggatgagc
tggcccgagggtgacgagacggcgctgcgcaggctgggcgaggcatggcgccaagcggcc
agtgaagtcggcggtgtgatccagcagggtcaagcggcggccgatgcctcgctggcctgt
atggagggcgagacggccgacgccttccaggagatgtggaatcagttcgtcgcgggtgat
gaacagttcctcgtctccttacaggagttctgcgaggggctcggggcgagctgcgacgat
tccgcgctcgaggtcgaatacaccaagtacatgatcatcgcatcgctgatcatgttggcg
attcagatcgcggcgatgatcgcggcggcgttcgtcaccttcggcaccgcgagtgcgggc
atcccggtcgcccaggcggcgaccaggctcaccgtgcagatgatcttccggcagctcatc
atctcgattctgaagagtgtggccatcgaggtggccatgtcggtcggcctcgacgccgcc
atccagggcctccagatgctgcagggcaaccgggacgggatggactggggcaagatcaag
gattccgcgatcagcggggtcgtctccggtgtcgtcggcggcgtctccggggtcgtgccg
accggtgcgaccggcgcgctgtccgacagcgtgggcggaaccctggccgaccaggcgtta
cgcggggcgaccaggggtgccgccgagggcgtcgcgagcaccgtggccgaaggcttggtc
accggccagggcttcaccggccaagacctgctctacggtgcgacctccggtgcggtcggc
ggcgcggtcgacggggcgcagagcggcgccgaggggctgagcgccgcgaacatcgatacc
gacggcggcgggtccggggcagatggtgggtccggctcggacggcggcgggtctggctcg
gacggtggttctggtccggatggtggctctggtccggcgggcgggcttccgtccgagtcg
ggtacacccaactccctgctcagcgccaccggcggcagccccgattccggcggctcgggg
ttggggaacacgagcagcggcgggtcttccggcggctctgggagcagttcgaccagcggc
tcgaattcgggttcgagcagtggtggttcggatggtggcggcggttcggacagcggcggc
accagcccgaatagcaccgcgagtacgacgccgagcagctccgggctcggcgacagcgga
ccgagcacgaccagtacggccccggactcgagtccctcgaccagcggcggccccgattcg
ctcggcgctcgtctcgatggcgggtccgactcgggcggctcggcaccgaccgcaccggat
tcgggcttatcaacgcagtccgcaccgctagcggcggattcgggttcgccgggcggcagt
ccctcggacggcggcggcacctcgacaggcggcagcccgccggacggcggaaggccggac
agcgccgggccgagcacggatgcgcccgcgtcctcctcgacgacgtccgcaccacaaccc
gacgggcccgccgccggaccgacgccggattccggttccacaactccgtcttcctcggcg
gcgccggatgcagccacgcccgacgctgcggggtcgtcgaacccatccagcccgggcggt
ccgaccaatccggctccggacgccggatccggtaacggcgggccgggaggcggcggttcc
ggtggcggtgcaggcggcactccggctggcggcactccggctggtggcagcgcaccggga
ggcagcagcccggatcgcagcgccacggcgggcccgccggatgcaccgaccacctcgaac
ggcccctcggcggggccgatatccgccccggatctcgatggcgctccggacccagcccgc
agcgggtccaccgcgtccgccgcaagcttcgacgccccgtcgggagccgcgcccggcggc
gctccgacgagccccaccgccgattcgaccggcggcccaggcaacggcggatcgaccccc
ggatcgtcgcagtcccccagcggacctcgcccagaccaggtcccgagcggtgcgaccccg
cgtccaggtgactccgcgccccaggcgccgggcaatcccggtgggttcggcccgagtagc
cccaacgacccggcgggtttcggccccagcggtggcgtgcccggtccaacgaaccccggg
ccgaatgccccgcactcgaccggcggactggacgccgcaggaccggcgggcttcggcccc
accggtcccggtgctaccggccccagaccagaagcgcccccgtcggcgcctctgacgatc
tcggcgagttcgaccggtggatccgacgcgccgttctccggcggacagccgggtttccag
ggcggcggctctcccagtgctcccgcggccggtaacccggcgggtttcggcggctcggct
ggcggcccagcgggtggcatggccggcggcatgcccgggtccgtgccgttcggaccggct
ccgggcggaatgggcgggcagccgggcggcggtccgggttcgttcgggcccgccggacag
ccggctccgcaacccggcggtgggcaacccggacccggcaggcccggaccacagcagccc
ggcctcggacatcccggctcgccgccgcccgcgggtccgccgcctgcgggtccgccgcag
cccggccacagcgggccaccaccacgcggcctgccaccacagaacttcggcggaccgccg
ccgaatcagtccggtggcccgaccccaccgcagggcggaccgggttacccgacgcaaccg
cgtccggcaggcccgcctatgcccttcgggccaaccggcccgggtggtccgggcggtccc
ggcggcttcggtcaaccgggccccggccccggccagccaggcccgcaacagctagcgccg
caccagggcgggcctgggaaccccggacagcaacgaccattcggcccacccggccagttc
ggtccggggacgccgcccggcggtccgaaccagttcggccccggtcaacaagggcctccc
caagtcaatcaaccccacggcccgcgtcccggacagttcgcgccgccccccaatggtctc
ggcaaccagcccggcggcttcggcaaccagcctccgggcttcggccagcaacccggccat
cccggcggtcaacagcccggtggattcggtcaaccgccgaacagaccagggcagttcggc
cccggcccggcaccacacggtggtcccggccagtccggcccgttcggtggccaacccgat
ggcccaccacgcccgcaccagcaggccggaccgccgcaggctccgcctgcccaggtcccg
ccgcaaggtggaccgaaccgacccggacccgacggcccggcaccgcaacccggccgcacg
gatgtgcctgcgccccgcagcgacacgcccccggccggagccgatcgcaacgcggcaccc
gtcccgcgcggcgacggcggcgcggaccgcaccccgcctgcggaccggaagccgaccacg
ccggagtccccgcaggcccccgccacgccgaggacgccggacagcgcgtcgcccgtcgga
ggcccgcctgccgatgcggggccgggttccggagacccgattccgagctccgggccatcg
gatgccgcgtcgccgaccgactcggcagacagcacaccggataccgatagcggtctcccg
ccgatcgagcacgagtaccccttgtccgacggctcgacgtacgagacgagcctcggtgcc
gaccaactcgacaccaccgacggtttcgagagcagcctggccgaacggttggaaggcacc
ggactcactccggaacagttcgacgagatccggcaacgcccggtcgagagctacacggct
gcggaggtcgaggcgatccgggacgtgcgggacggggtcgagaccccgcccggcgaggtc
gtgcagcgggtgctgaccggcgaggtcgcggcgaactacctgcagaacaatccggtgttc
atccccgatggcagcggcggccaacgacagatcttcgacccgaccgaggcgggcggcttc
accacccgctatcgggatgtcgcggagttgcgcagcccggccgacgtcatcgagggactg
cggctggactacaccgacggcggctacgaggaccgcaacggccgtccgccgtatctgccg
gacgacgcgagcatcccggtgctgcggttccccttggaccagcccgacaacctggcgatt
ccctatggcggcacgacgccggagggcatggcgaacatgggcggcgacacccgccaggac
ccgccgttcaccggcaacggcttccccggcagcgaacagcacgccaccccggagttcatc
ctgagcccgaccgaactcggcgaggtcgccgagctgtgggtggtggatcgagacggcaac
gagagcctgctcggcgccttcgacccggacaacgggcagtggaacaccacccccgacggc
gatgcctggctggccgcgaacgaggcgagccgcaccgagctactggcggagcgcgatgcg
gcggcgggcgccgaccccgccacgccgagacccgacaccacgccggacgcggacccgacg
tcgacacccgaccacgatgccgattcgagcacggaccccgattcgtcccccgaccgcgac
ggcgaccccggcgatccggccgacagccccgccgacccgcgaccgctgacaacggaacaa
caggcgatcctcgacgccagcaccacgaccccggcaggccgggccttcttccccgacgag
ccagaaacccaacgctcggcgcagaccgtcgcccccgacccggatggccgccggacctac
gacctgcacggcgaccaacagaacgtcttcatcggcgaccagacactggacgcagcaggc
ttcgccgacatcgtccgcgccgacccggactggaacggcgaggcgatccgcctgctgtcc
tgcgacacgggtggcctaccggacggattcgccgccgatctagcccgcgaactcggcgtg
gaggtactagccccgacccagatgggctgggccaacgcggacggcagcctgttctcctcg
tccggcacccaggacgccgacggaaactggactcccgccgacccgccggacggcacctgg
caggccttccaaccggacggcaccaccaccgatttcagtgacggcccctacctcggcgac
agcgcggcagagggtggtccggacgatgctcgggcacgggcgaatacgcggtcgacgaat
caggtgccggattacgtcccaccagtcatggatccgaacgttccaccggttcccgtgtta
ctcggcccgaatcaacgattcgccgatgcggtaccaaatccggaaccgaacacgtggtat
cgagttgatctcgaattcgagaacgctcaaggttccctagaaatcaagaccgttggcgat
tattttgtcggcgagcgttgcgcggataccggaaggccaaaacttgaatacgtcactgcc
gcagttcccaacgagagtccgggaaaaagtgcagacgcctatttcccaccagggggcgcc
acagggccggcattgggcgccatcgacctgctgttagatccagaagtcgtctacaatgtg
gccgacggccacggaaatcaacggttccgcaccgatggcgaggctgaaccgccgcccgca
gttacatgggacgtccccgacgcagcattaccgaacgagggttcctcagatatccctccc
ggcgaagcctcggaggacacgcggtcagcaccttcgccaccgttcactgttgtgttaacc
gaagaatggaatccacaggaaggctcctttacctcaggctggggcgcccgacccgaggaa
gaccgcccagcaaacgcacagatcactctcaacagaccgaatggtgacggctggcatgcc
acaattttcaccgacgacgctggcaacatcagtcgaatactcacctgggcgggaccgcat
gagaatctgttcaaccctgaactcggcaaccgagaaacgatgcatttccatcatgaacat
accaccgcatccgacgtccagccacggacaggagcgccgatcccaaatgtagtatacgga
gtggtcgatccaccgaaaatcggggaatcaccgggcgatccgcgctggctttttcacacc
gacgaaaaaggtaataccgctgccgccagcggtgccttcgattacgacaagagtcatcgg
catgctcgggagagtgccatccaactggccgttggccaagttgcctcaaagaacgagtac
tcgggtgttatggaagccgcaggtgggcatattttcggccacgcagcggcaggcatcagc
gagcgggtaaattatatggcgcaatgggcggcacagaacgcaacttttggccagcatttt
atccctaccagctggggcgagatggaaaaccatctcaaggctattgccggacctgatctc
agggttgatcgattcgatttctgggctgacagaaacgggcgggaaactccggaagctgtc
cacgtacggttccaacttacgatgggcgacccgcccgtcacatcgacgcacctgaggagc
tttccgaatgtaccccctacagtcccttaa
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