Atlantibacter hermannii: NCTC12129_01542
Help
Entry
NCTC12129_01542 CDS
T05790
Symbol
rbn_1
Name
(GenBank) ribonuclease BN
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ahn
Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahn03016
]
NCTC12129_01542 (rbn_1)
Enzymes [BR:
ahn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NCTC12129_01542 (rbn_1)
Transfer RNA biogenesis [BR:
ahn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC12129_01542 (rbn_1)
Prokaryotic type
NCTC12129_01542 (rbn_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
VDZ72448
UniProt:
A0A447LL35
LinkDB
All DBs
Position
1:complement(1422506..1423420)
Genome browser
AA seq
304 aa
AA seq
DB search
MELTFLGTSAGVPCKSRNVTAMVFNPMNNAAQYWLFDCGEGTQHQMLHTVFNPGKLNKIF
ITHLHGDHIFGLPGLLCSRSMAGNENPLTVYGPAGIRQFIEMALQLSGSWTGFPLEIVEI
TAGEVFCDEEFRVTAYPLTHPVECYGYRIEQHDRPGALDASRLKAEGITPGPLFQQLKRG
ESVMLDDGRMINGQDYLGPARKGKTLAIFGDTGPTSAALTLASGVDVMVHETTLEAAMAE
KANSRGHSTTVQAAEVARAAGVGRLVITHFSSRYDDAGCEALLRECREIFPDTIAAKDFM
TVQI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaactgacttttttaggcacatccgccggggtaccgtgcaaaagccgcaatgtgacc
gccatggtgtttaatcccatgaacaatgcggcgcaatactggctgtttgactgcggcgaa
ggcacccagcatcagatgctgcataccgtctttaatcccggcaagctgaacaaaattttt
attacccatctgcatggcgaccatatttttgggttgccagggctattgtgcagccggtcc
atggcgggcaatgaaaacccgcttacggtctatgggcctgctggcattcgtcagtttata
gagatggcgttgcagctcagcggttcctggaccgggtttccgctggagatcgtcgaaatc
accgccggtgaggtattttgcgatgaggagtttcgcgtcacggcgtatcccctcacccat
ccggtcgaatgctatggctatcggattgagcagcacgacaggccaggcgcgctcgacgct
tcgcgtctcaaggctgaaggcatcacgcctggccccctgttccagcagttaaagcggggt
gaaagcgttatgctggatgatggccgaatgattaacggacaggactacttaggcccggcc
cggaaaggcaaaacattggcgattttcggcgataccggccctacgtccgctgctctcact
ctcgcaagcggcgttgacgttatggtgcatgaaacgacgctggaggccgcgatggcggaa
aaagccaatagccggggccattccactaccgtgcaggccgctgaagtggcaagggctgcc
ggggttggacgactggttataacccatttcagctcacgctatgatgacgcaggctgcgaa
gcgctgttgcgcgaatgcagggaaattttccctgacacaatcgccgccaaggattttatg
acggtgcagatataa
DBGET
integrated database retrieval system
