KEGG   Atlantibacter hermannii: NCTC12129_02159
Entry
NCTC12129_02159   CDS       T05790                                 
Symbol
ycfD_4
Name
(GenBank) cupin superfamily protein family
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ahn  Atlantibacter hermannii
Brite
KEGG Orthology (KO) [BR:ahn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ahn03009]
    NCTC12129_02159 (ycfD_4)
Enzymes [BR:ahn01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     NCTC12129_02159 (ycfD_4)
Ribosome biogenesis [BR:ahn03009]
 Prokaryotic type
  ribosomal protein modification factors
   NCTC12129_02159 (ycfD_4)
SSDB
Motif
Pfam: JmjC_2 Cupin_1 Cupin_2 AraC_binding Cupin_8
Other DBs
NCBI-ProteinID: VDZ73052
UniProt: A0A447LMV6
LinkDB
Position
1:complement(1996810..1997385)
AA seq 191 aa
MKATITSGESNWSLLVQAVNHWHEPAAALMRPFRALPDWRTDDLMISFSVPGGGVGPHLD
QYDVFIIQGVGRRRWRVGEKVPMKQHCPHPDLLQVDPFDAIIDEELEPGDILYIPPGFPH
EGYSLENSMNYSVGFRAPSGRELISGFADYVLQRELGSQPLYRSGRSGAPVSRRHTTPGA
GESAWDDARSD
NT seq 576 nt   +upstreamnt  +downstreamnt
ttgaaagctacgatcacctcgggcgaaagtaactggtcactgctggttcaggccgttaac
cactggcatgagcccgccgcggcactgatgcggcccttccgcgccctgcccgactggcgc
accgatgatctgatgatctccttctcggtgcctggcggcggcgtgggcccgcatcttgat
cagtatgatgtgtttattattcagggcgtgggccgtcgccgctggcgcgtcggtgaaaaa
gtgccgatgaagcagcactgcccgcacccggacctgctgcaggtcgatccgttcgacgcc
atcattgatgaagagcttgagcctggcgacattctgtatatcccgccgggattcccgcat
gaagggtattcgctggaaaactcaatgaactattccgtgggtttccgtgcgccgagcggc
cgtgaactgatcagcggcttcgccgattacgtgctgcaacgtgaactcggcagccaaccg
ctataccgatccggacgttccggcgcgccagtatcccgccgacatacaaccccaggagct
ggagaaagtgcgtgggatgatgctcgatctgattaa

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