Actinomyces howellii: NCTC11636_02043
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Entry
NCTC11636_02043 CDS
T06068
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ahw
Actinomyces howellii
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ahw03009
]
NCTC11636_02043 (rlmC)
Enzymes [BR:
ahw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
NCTC11636_02043 (rlmC)
Ribosome biogenesis [BR:
ahw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC11636_02043 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_11
MTS
Methyltransf_12
TPMT
Methyltransf_15
Met_10
Motif
Other DBs
NCBI-ProteinID:
VEG29426
UniProt:
A0A448HIP4
LinkDB
All DBs
Position
1:complement(2405332..2406792)
Genome browser
AA seq
486 aa
AA seq
DB search
MLRDPRPLSPPLRRDPRPGRSCLRVLGPAAGIADNGPMPPAPALATPAARCPVHDSGACR
SCPHLSTPLPRQLEVKQERVAALLSEGPNPVPRGVWQEPAASAPTRLRNKAKMVVSGTAR
APVLGILDAGLHGVDLRRCPLHVELIEQCLPVVAELITDLGLEPYDVRARRGELKHVLVT
ASPDGDLMVRLVLRSRRHLEDIRRALPALRRRLETLAVLSVNIQPVHQAVIEGEEEIVLT
DGPEGDSLLMRLRLPAPGRDGSGSPAGPLDAPGTELLLSLPPRSFFQTNTAVAAELYATA
RQWADDALPPSGPCDPAGADGPQAARPSSARPSSARPSPGAPEEVWDLFCGVGGFALALA
GPGRRVLGVEVSAQAVDGARRSAARMRLGPDAVRFETGDARVLDPGAPGSAPDLLVVNPP
RSGIGAELATRIEACGVGRVLYSSCNPLTLRRDLAAMPSLEARRARLFDMFPHTDHAEVL
VELVRT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgctccgggacccgcgccccctgagtcccccgctgcgccgggacccgcgccccggccgg
tcctgcctgcgggtgctcgggcccgccgccgggatcgccgacaatggccccatgcccccc
gcgcccgcactcgccacgccggcggcacggtgccctgtgcacgactccggtgcctgccgc
tcctgcccgcacctgtcgacgccgctgccccgccagctcgaggtcaagcaggagcgggtg
gcggccctgctgtccgaggggcccaaccccgttccccgcggcgtctggcaggagcctgcc
gcgagcgcgccgacgcgcctgcgcaacaaggcgaagatggtcgtctccggcacggcccgc
gcaccggtgctcgggatcctcgacgccgggctgcacggggtggacctgcgccgctgcccc
ctccacgtcgagctcatcgagcagtgcctgccggtcgtcgccgagctcatcaccgacctg
ggactcgagccctacgacgtgcgcgcccgccgcggcgagctcaagcacgtcctggtcacc
gcctcccccgacggcgacctcatggtccggctcgtgctgcgcagccgccgccacctcgag
gacatccgccgggccctgcccgcgctgcgccggaggctggagaccctggcggtgctgtcg
gtcaacatccagcccgtccaccaggcggtcatcgagggcgaggaggagatcgtcctgacc
gacggccccgagggggacagcctcctcatgcgcctgcgcctgccggcgccggggcgcgac
gggtccggctcgcccgcgggaccgctcgacgccccgggcaccgagctgctcctgtcgctg
cccccgcgctccttcttccagaccaacaccgccgtcgccgccgagctttacgccaccgcg
cggcagtgggccgacgacgccctcccaccgtccggtccctgcgacccggcaggggccgac
ggaccgcaggcggcccgtccgtcctcggcccgtccgtcctcggcccgtccgtccccgggc
gcccccgaggaggtgtgggacctgttctgcggcgtcgggggattcgccctggccctggcc
ggtccgggacggcgggtcctcggtgtcgaggtctccgcccaggccgtcgacggggcccgg
cgcagcgcggcccggatgaggctggggcccgacgcggtccgcttcgagaccggcgacgcc
cgggtgctcgatcccggcgccccgggctcggcccccgacctgctcgtggtcaacccgccc
cgctccgggatcggggcggagctggccacgaggatcgaggcctgcggcgtcggacgggtc
ctgtactcctcgtgcaacccgctcaccctcagacgcgacctcgcggcgatgccctccctc
gaggctcgcagggcacggttgttcgacatgttcccccacaccgaccacgccgaggtcctc
gtcgagctcgtgcgcacctga
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