Actinomyces howellii: NCTC11636_02146
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Entry
NCTC11636_02146 CDS
T06068
Name
(GenBank) Fibronectin type III domain
KO
K20276
large repetitive protein
Organism
ahw
Actinomyces howellii
Pathway
ahw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ahw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11636_02146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Bact_surface_Ig-like
Pur_ac_phosph_N
Motif
Other DBs
NCBI-ProteinID:
VEG29637
UniProt:
A0A448HJ80
LinkDB
All DBs
Position
1:complement(2530345..2536383)
Genome browser
AA seq
2012 aa
AA seq
DB search
MSTVVGSRVVMRWSSLRTRRRLSSVVAALAVTALGVAAWAHDGSPQADVDLNDGGVWVTS
TDQHLVARLNYPSRQVDGAIRTTTSTFDVTQSENDVLVPDTAVGAVSAVNPTTVSLSTAT
QLTTGATVAQGGDRVIAVDGAAGTVRATSVSAVGSLASAPPVVESMPDVVAVAGTDGSVH
AVSAKAGRAVTVPVTASAWDEPEQVALPLTAGTDVAVTAVGERTVVLDRGAGVLYLPDGA
SRDLGETGLVLQQPGPDADAVLVASRTELISVPLDGSAPTTVPAVEEGTVPEGVAAQPVR
LGDCVYSAWSGSGQFVRQCDGRTETVHDDALASSTTPVFRVNREAIVLNDITQGTVWLPD
ELLVLVEDWTDVTSQTDDTSEQEDDSAQTSESQTLPERTEENHAPEANDDTFGVRPGRST
ILPVLANDSDPDGDVLTATPGDPGSAATVTTAQSGLALRLDVPEEATGTISLPYTADDGR
GLSDSAVATVEVRDWTLNEAPVQTSTPTLTVSGNASASLSVLGSWQDPDGDTFYLVSAAG
EGLDVRTTNEGTVTVRDLTGAPGAREVSVVVSDGRATATGTVTVDVQPSDTAVPVANADH
VRVVAGTSAVVAPLDNDISPTGEALSLAAVQEAPTGTQVETNLQAGTFTFTAESAQTLYL
TYDAAAGPRVAQGIVRIDVVEPSDPTVPPVTEDDTALLREGGAVTVAPLSNDFDPAGGIL
VLQSASAPAESGLSVTVVDHSLLQVSAAATIGQSVDVEYTVSNGTSTATGQVTVAPVTSE
QVQVPVATQDTAVVRAGDVVSVPVLDNDTSPSGLALSVSDELGLAGDDLGTAWVSEDLVR
FKAGDTPGRTSLSYTVTDTAGQTTSTRVDIEVRVRDDAANVAPSPQGLEAGTVAGSSTRI
TVPLDGIDPDGDSVSLVGLDQAPTMGSVRTGTTWLEYTPSAGAMGTDTFTYLVEDRFGAQ
STATVRVGVAPASATNNAPQAVDDVVTAKPGRTVAADVVSNDLDADGDSLTLEGTPTSED
EALTLSVRGGQVVAELPQAEGVYTVRYTVTDSRGGTDLGTLTIQVLQDAPLISPVAVDDH
VTVEQVDAAGVVTAPVLDNDKDADGSPWDLTLSTDDPGATVVDQSLRVTVGTERRFVLYT
VTDQDGQTGHAVLVVPALSDLKPWLNSSAVPVRVPADTTTEVDLSSYVLTRAGTSPVVTA
AEGLRTGAGLDSAEPAGDGGSLKITPTGGFTGQTTVSLTVADGTGDDALSSHLTLPIVVE
STTNTPPVLTPTEIIVAPGEGEVTADLAQMTRDADEDPLTFSAGGAPEGFEVSLSGSTLS
VSAAPGAAVGTTGSVDVTVDDATNDPVTVSVPLRVSDSTRPLMTTVPTTLESDGSPVSVD
VAGLVTNPFPGQAVTLADAPRVTSGTGEVSASGTVLTISPGAGFSGRLVVSYTALDATGS
MARAASGTVTVTVASPPDAPVGVTAQPAGSSSMQVSWTPGSDNGSSITGYTLTETSGAGT
WSCTGSPCLASGLSMGGTYSFSVVATNAVGSSSPSAASAPVRLTLTPTAPSSLTAVDGGE
GAVDLSWQPSSAPDASVTYDVAIMQGGSVVASQTTTGTSVRLAVRPGTYTAQVCAYVDAA
GQKNCASVSVRSVDQPTAPGAPNVEYRAGAGLLVSWGAAGANGGSLSYSVTVSGAVTTTV
PAGGATSVTVPTPSLGSGRHAVTVTVTATTEVGSASSPPTSAEFRVTSAPPRPSVPVAAA
TGTSGQITVTTPATPVAGNGWDDDDIDIEYRVVDSAGNEAAGWGESTTFSGLRDGTSYTV
QARAVGEDDSAAVSEVVSSNAVTPQGPPSAPSVSCTPAGTGVSCSWTAGTGGGRATSHEG
ATSSDGANTEAVAASGTKTFEPGAGGSATWCVRSTNDLGHSSAWSCDSATASVGQGTFRI
NTTAPEAVCTAQDLRETGFPANSCWRIVIDVTGFAPNSTVTCSYQYRDRLEAPDAPLKDY
SESFSVDSSGGARKVFPHRASSPNQTIACVQR
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggtggtcgggtcgcgggtcgtcatgcgctggtcctcgctgaggacccggcgc
cggttgtcatcggtcgtggccgccctggccgtgaccgccctgggcgtggccgcctgggcc
catgacggctccccccaggccgacgtcgacctcaatgacgggggcgtgtgggtgacaagc
accgaccagcacctcgtggcccggctcaactacccctcgaggcaggtcgacggcgccatc
cgcacgacgacctcgaccttcgacgtcacccagtccgagaacgacgtgctcgtgcccgac
acggccgtgggcgcggtctccgccgtcaaccccacgaccgtgtcgctgtcgacggccacc
cagctgaccaccggggcgacggtcgcccagggcggcgaccgggtcatcgcggtggacggc
gccgcggggaccgtgcgcgccacgagcgtgagcgcggtgggctcgctggcctcggcgcct
cctgtcgtggagtccatgcccgacgtcgtcgcggtggcgggaaccgacgggtcggtccac
gcggtgtcggccaaggccgggcgggcggtcaccgtcccggtcactgcctcggcctgggac
gagccggagcaggtcgccctgccgctgaccgcgggcactgacgtcgcggtcacggcggtg
ggcgagcgcacggtggtcctcgaccgcggtgcgggcgtcctctacctgcccgacggcgcc
tcaagggacctcggcgagacgggcctcgtcctccagcagcccggccctgacgccgacgcg
gtgctcgtggcctcgcgcaccgagctcatctcggtgccgctggacgggtcggcccccacg
accgtgcccgccgtcgaggaggggacggtgcccgagggcgtggccgcccagcccgtgcgc
ctgggcgactgcgtctactcggcgtggtcgggctccgggcagttcgtgcgccagtgcgac
ggccggaccgagaccgtccacgacgacgccctggcgtcctcgacgacgccggtcttccgg
gtcaaccgcgaggccatcgtgctcaacgacatcacccagggcacggtctggctgcccgac
gagctcctcgtgctcgtcgaggactggaccgacgtgacctcccagacggacgacacctcc
gagcaggaggacgactccgcccagaccagcgagtcccagaccctgcccgagcgcaccgag
gagaaccacgccccggaggccaatgacgacaccttcggcgtgcgaccggggcggtcgacg
atcctgccggtgctggccaacgactccgaccccgacggcgacgtcctgacggccaccccc
ggggaccccgggagcgccgccaccgtgaccaccgcgcagtcgggcctggccctgcggctc
gacgtccccgaggaggccaccggcacgatcagcctgccctacaccgctgacgacgggcgc
ggtctgtccgactcggcggtggccacggtcgaggtgcgcgactggaccctcaacgaggcg
ccggtgcagacctcgacgccgaccctgaccgtctcaggcaacgcctcggcctccctgagc
gtcctgggcagctggcaggaccccgacggcgacaccttctacctcgtctccgcggcgggc
gagggactcgacgtgcgcacgaccaacgagggcacggtcacggtgcgcgacctgaccggc
gcccccggtgcgcgcgaggtgagcgtcgtggtctccgacgggcgcgccaccgcgaccggc
acggtcacggtcgacgtccagccctccgacaccgccgtcccggtggccaacgccgaccac
gtgcgcgtcgtggccgggacctcggccgtcgtcgcccccctggacaacgacatctccccc
accggggaggcgctcagcctcgccgccgtccaggaggcccccacggggacccaggtcgag
acgaacctccaggcagggaccttcaccttcaccgccgagtcggcccagaccctctacctc
acctacgacgccgccgcggggccccgggtggcccagggcatcgtgcgcatcgacgtcgtc
gagccctccgaccccaccgtccccccggtcaccgaggacgacaccgcgctgctgcgcgag
ggcggcgcggtgacggtggcccccctgtccaacgacttcgaccccgccggggggatcctc
gtcctccagtcggcctcggccccggccgagtcgggcctgagcgtcacggtcgtcgaccac
tccctgctccaggtctccgcggcggcgaccatcgggcagagcgtcgacgtggagtacacc
gtctcgaacgggacctcgaccgccaccggacaggtgacggtcgcgcccgtcacctccgag
caggtccaggtgccggtggccacccaggacaccgccgtcgtgcgcgccggcgacgtcgtg
tcggtgccggtgctcgacaacgacacctctccctcgggtctggccctgagcgtgtccgac
gagctcgggctggccggggacgacctgggcaccgcgtgggtgagcgaggacctcgtgcgc
ttcaaggccggcgacaccccggggcggacctcgctgtcctacacggtgaccgacaccgcc
ggccagacgacctcgacgcgggtcgacatcgaggtgcgcgtgcgcgacgacgccgccaac
gtggctccgagcccccaggggctcgaggccgggaccgtggccggctcctcgacgaggatc
accgtgcccctcgacggcatcgaccccgacggcgactcggtcagcctcgtcggcctcgac
caggcgcccacgatgggctcggtgcgcacgggcacgacctggctcgagtacaccccctcg
gccggggccatgggcaccgacaccttcacctacctcgttgaggaccggttcggcgcccag
tcgacggccacggtgcgcgtcggcgtcgccccggcctcggcgacgaacaacgccccccag
gccgtcgacgacgtcgtcaccgccaagccgggccgcacggtcgccgccgacgtcgtgtcc
aacgacctcgacgccgacggggactccctgaccctcgaggggaccccgacgagcgaggac
gaggccctcaccctgtcggtgcgcgggggccaggtcgtcgccgagctgccccaggccgag
ggcgtgtacaccgtgcgctacacggtcaccgactcccgcggcggcaccgacctgggcacc
ctgaccatccaggtgctccaggacgccccgctcatcagccccgtcgcggtcgacgaccac
gtcacggtcgagcaggtcgacgccgcaggggtggtaaccgcccccgtgctcgacaacgac
aaggacgccgacggctcgccgtgggacctgacgctgagcaccgacgacccgggggcgacc
gtcgtcgaccagtccctgcgggtgaccgtgggcaccgagaggcgcttcgtgctctacacg
gtcaccgaccaggacgggcagacgggacacgccgtgctcgtcgtcccggccctgagcgac
ctcaagccgtggctcaactcctcggccgtcccggtgcgcgtcccggccgacacgaccacc
gaggtcgacctgtcctcctacgtcctcacgcgggccgggacctcccccgtcgtcaccgca
gccgaggggctgcgcaccggggccgggctggactccgccgagcctgccggcgacggaggc
tccctcaagatcacgcccaccggcgggttcaccggtcagacgaccgtgagcctgacggtg
gccgacggcacgggcgacgacgccctgagctcccacctcacgctccccatcgtcgtggag
tccacgaccaacaccccaccggtcctcacccccaccgagatcatcgtcgcccctggtgag
ggcgaggtgaccgctgacctggcgcagatgacgcgcgacgccgacgaggacccgctcacc
ttctccgccggcggcgctcccgagggcttcgaggtctccctgtccggctcgaccctgtcg
gtctcggccgccccgggagccgcggtcgggacgaccggctcggtcgacgtcaccgtcgac
gacgcgacgaacgacccggtcacggtcagcgtgcccctgcgggtgagcgactcgacccga
ccgctcatgaccaccgtgcccaccaccctggagtccgacggctcgccggtgagcgtcgac
gtggccgggctggtcaccaaccccttcccggggcaggccgtcacgctggcggacgccccc
cgcgtcacctcgggcacgggcgaggtgagcgcctcgggcacggtgctgacgatctccccc
ggcgcaggcttctccggccgcctcgtcgtgtcctacacggctctcgacgcgaccggctcc
atggctcgtgccgcctcgggaaccgtcaccgtgaccgtcgcctcgccccccgacgcccct
gtcggggtcacggcccagcccgcaggatcctcctcgatgcaggtctcctggacaccgggg
tcggacaacggctcgtcgatcacgggctacaccctcaccgagacctccggcgccgggacc
tggagctgcaccggctccccgtgcctggccagcggcctgtcgatgggagggacctactcc
ttcagcgtcgtggcgaccaacgccgtcggcagctcgagcccctcggcggcctcggcgccc
gtgcggctgaccctgacgcccacggccccctcgtccctgacggcggtcgacgggggcgag
ggcgcggtcgacctgtcctggcagccctcctcggctccggacgcgtcggtcacctacgac
gtggcgatcatgcaggggggctcggtggtggcctcccagacgacgacgggcacgagcgtg
cggctggcggtgcgcccggggacctacacggcccaggtctgcgcctacgtcgacgcggcg
gggcagaagaactgcgcctcggtctccgtgcgctcggtcgaccagcccacggcgcccggt
gccccgaacgtggagtacagggcgggggccgggctcctcgtcagctggggcgccgccggg
gcgaacgggggctccctcagctactcggtgaccgtctccggagcggtgacgacgaccgtg
cccgcaggcggggcgacctcggtgacggtgcccaccccgtccctgggctcgggcaggcac
gcggtgaccgtcacggtcaccgcgaccaccgaggtcgggtcggcctcctccccaccgacc
tcggccgagttccgtgtgacgagcgccccaccgcggccctcggtcccggtcgccgccgcc
accgggacgagcggtcagatcaccgtgaccaccccggccacgccggtggcgggcaacggc
tgggacgacgacgacatcgacatcgagtaccgggtcgtggactcggcgggcaacgaggcg
gccggctggggcgagagcacgaccttctcgggcctgcgtgacggcacctcctacaccgtc
caggcgcgggccgtcggcgaggacgactccgcggcggtctcggaggtggtcagctccaac
gccgtcaccccccaggggccgccctcggccccgagcgtcagctgcacgcccgcgggcacc
ggcgtgagctgctcgtggaccgccggaaccggcggggggcgggccacgagccacgagggg
gccacctcctcggacggggcgaacaccgaggcggtcgcagcctcgggcaccaagaccttc
gagcccggcgccggcggctcggcgacctggtgcgtgcgctcgaccaacgacctggggcac
tcctcggcctggtcctgcgactcggcgacagcctcggtgggtcaggggaccttccggatc
aacaccaccgcgcccgaggcggtgtgcaccgcccaggacctgcgcgagaccggcttcccg
gccaactcctgctggcgcatcgtcatcgacgtgacaggattcgcgcccaactccacggtc
acctgctcgtaccagtaccgtgaccggctcgaggcgcccgacgccccgctcaaggactac
tcggagtccttctccgtggactcctcaggaggagcccgcaaggtcttcccccaccgggcc
tcctcacccaaccagaccatcgcgtgcgtccagcggtag
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