Pseudalgibacter alginicilyticus: APS56_11870
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Entry
APS56_11870 CDS
T04100
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ahz
Pseudalgibacter alginicilyticus
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahz03019
]
APS56_11870
03009 Ribosome biogenesis [BR:
ahz03009
]
APS56_11870
Messenger RNA biogenesis [BR:
ahz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
APS56_11870
Ribosome biogenesis [BR:
ahz03009
]
Prokaryotic type
rRNA processing factors
APS56_11870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ALJ05780
UniProt:
A0A0P0CSH9
LinkDB
All DBs
Position
complement(2875948..2877495)
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AA seq
515 aa
AA seq
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MDKELIIRSSSDDVDFALLKDGKLIELQKDEGSNNFSVGDVFIAKIRKAVPGLNAAFVNV
GYDKDAFLHYHDLGPKLPSLLKFTKSVSTGKLKDFSLKNFPFEKDIDKDGKIVDVLKSNQ
SLLVQIVKEPISTKGPRISSELSIAGRYIVLVPFSNRISISQKIESKDEKDRLKRLVKSI
TPPGFGIIVRTVAEGKKVAELDKDLQNLLSRWTAMCKKLHKAHHPSKVLGEMNKASSILR
DIFNDTFTGITVDDEELYYQIKDYVQEIAPNKESIVKLYQSNVPIFEKFGIERQIKTSFG
KTVSMAKGAYLVIEHTEALHVIDVNSGNRSNKANNQEDTALEVNLIAATEMARQLRLRDM
GGIIVVDFIDMTNAENRQKLFNHLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREENPDDILNGSEVEAPIGIVQKVNHDLELLIKKDYKKLTLNTHPFIAAFLTKGFPSIR
SKWFLEHKKWVKVLPRDAYTYLEYHFFDKDGNQIK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaattgattattcgatctagttctgatgatgttgattttgccttattaaaa
gatggaaaacttattgaattacagaaagacgagggtagtaacaacttttcggttggtgat
gtgtttatagccaaaatacgaaaagctgttcctggattaaatgctgcatttgttaatgta
ggttatgataaagatgcttttttgcattatcatgatttaggtcctaagcttccttcgctt
ttaaaattcacaaaaagtgtaagcacaggtaaactaaaagatttttctttaaaaaacttc
ccatttgaaaaagatattgataaagacggcaaaattgttgacgtcttaaaatcaaatcaa
tcgctattggtacaaatagtaaaagaacccatatccaccaaaggacccagaattagttct
gagctttccattgctggtagatatattgttttagtacctttttctaatcgcatttctatt
tctcaaaaaatagaaagtaaagatgaaaaagaccgcttaaaacgattggtaaaaagcatt
acgcctccaggttttggtattatagttcgtacagtagcagaaggcaaaaaagtagccgaa
ttagataaagatttacaaaatttgctaagtcgttggacagcaatgtgtaaaaagctacat
aaagcccaccatcccagtaaagttttaggtgaaatgaataaggcctcctctattttgcga
gacatattcaatgatacctttacaggaataactgtagatgatgaagagctttattatcaa
attaaagattatgtgcaagaaattgcaccaaacaaagaatcaatcgttaaattgtatcaa
tctaacgttcctatttttgaaaaatttggaattgaaagacaaattaaaacctcctttgga
aaaactgtttctatggctaaaggcgcgtatttggtaatagaacatactgaagcgttacac
gttattgatgtaaacagtggcaacagatctaacaaagctaacaaccaagaggacacggcc
ttagaggttaacctaatagccgccacagaaatggctcgtcaattacgcttacgtgatatg
ggaggtattatagttgtagactttatagatatgaccaatgctgaaaacaggcaaaaactc
tttaaccatcttcgcgatgaaatgaaagatgatagagcaaaacacaaaatactgcctcca
agtaaatttggattgatacaaattacaagacagcgtgttcgaccagaaatgaacattaaa
acccgtgaggaaaatcctgacgatattttaaatggttctgaagttgaagcgcctataggt
atcgtgcaaaaagtaaatcacgaccttgaattactaataaaaaaagactataaaaagttg
actttaaacacacatccttttatagcggcctttttaacaaaaggttttccatcaatacgt
tctaaatggtttttagaacataaaaaatgggttaaagttttaccaagagatgcttacaca
tatttagaatatcacttttttgataaagatggtaatcaaattaaataa
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