Arachis ipaensis: 107606542
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Entry
107606542 CDS
T04301
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107606542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107606542
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107606542
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107606542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
107606542
NCBI-ProteinID:
XP_016164081
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All DBs
Position
B07:complement(3012369..3013894)
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AA seq
330 aa
AA seq
DB search
MTTIYTAMTRVDDERERLQQPPRVFLMPLPMVVGFPPSYCAAQPRFVERLPLLEPSPNSS
VVIRQVWAANADSEFQIIGSLIDKYRFVSIDTEFPGVVILPLNKNYRSLVPEETYQVMKA
NVDALKIIQLGLTLSDEHGNLPDLGTNNRTHYIWQFNFRDFNLMRDIHAKDSVALLRSQG
IDFARNEVAGVSSVHFAKLAAASGLLFNKALTWVTFHGAYDIGYLMKILTWGVLPKSLEE
FLVLVKELFGGNAYDVKHVMRFCNGLYGGLEKVAETLHVDRVAGKCHQAGSDSLLTCHTF
HKIRKTYFLANEDGFRKYVNVFFGLEIAKS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccatatatacagcaatgacgagggtggatgatgaacgagaacgacttcaacaa
ccaccgagagtttttctgatgccactgcccatggttgttggttttccgccttcttattgt
gctgctcagccaaggtttgtggagcgactgccgcttctagagcctagtcccaatagttcg
gttgtgataaggcaagtatgggctgccaacgctgattccgagttccaaatcataggcagc
ctgattgacaaatatcgatttgtctccattgacactgaattccccggagtagtcatcctg
cccctcaacaagaactaccggagtcttgttccagaggaaacttaccaagtcatgaaggcc
aatgttgacgcccttaaaatcatccagcttggactcactctctccgatgaacacggcaac
ctccctgacctgggaaccaacaacagaactcactacatctggcagttcaatttccgagac
ttcaacctcatgcgtgacatccacgcaaaggactctgtggcactcctacgcagccagggc
atcgactttgcacgcaatgaagtggctggagtttcttcggtgcattttgcgaagttggca
gcagcatctgggctgctgttcaacaaagcactgacatgggtcactttccatggtgcttat
gatattggatatttgatgaagattctgacttggggtgttcttccgaaaagcttggaggag
ttcttggtgcttgtaaaagagctgtttgggggaaatgcttatgatgtgaagcatgtgatg
aggttctgcaatggcctctatggcggtttagagaaggtggctgaaacacttcacgtagac
cgagttgctgggaagtgccatcaggccgggtctgatagcttgctcacctgccacaccttt
cacaagattagaaaaacttattttttggctaatgaggatgggtttaggaaatatgttaat
gtattttttgggttggaaattgcaaaatcttaa
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