Actinomyces israelii: NCTC12972_00199
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Entry
NCTC12972_00199 CDS
T06659
Symbol
rfbC
Name
(GenBank) Probable dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
air
Actinomyces israelii
Pathway
air00521
Streptomycin biosynthesis
air00523
Polyketide sugar unit biosynthesis
air00541
O-Antigen nucleotide sugar biosynthesis
air01100
Metabolic pathways
air01110
Biosynthesis of secondary metabolites
air01250
Biosynthesis of nucleotide sugars
Module
air_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
air00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NCTC12972_00199 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NCTC12972_00199 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NCTC12972_00199 (rfbC)
Enzymes [BR:
air01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
NCTC12972_00199 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NCTC12972_00199 (rfbC)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
VEG52626
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Position
1:complement(236151..237572)
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AA seq
473 aa
AA seq
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MTMTPKPLRIETTPIPGFLRIDLTVHGDNRGWFKENWQREKMLALGLPDFGPVQNNISFN
DEVGVTRGIHAEPWDKFVSVATGRVFGAWVDLREGPTFGTVYTCEIDPSVAVYVPKGVGN
AYQTLEPNTAYTYLVNDHWSPEARYTFLNLADETVAVPWPIPLEQAILSDKDKAHPRLEQ
VTPFPALPARGRRVLVTGAKGQLGRELMRQLPAAGFTATGVDLPDFDISDPATVQAVDWS
AYDVVVNAAGWTDVDGAQSAAGRSQAWQANATGPAHLARAASRHGLTLVHVSSEYVFDGS
AETHLEDEAPSPLGVYGQSKAGGDAAATACPTHYLVRTSWVVGEGRNFVRTMAELARRGT
KPQVVCDQVGRLTFTKDLAAGIIHLLSTQAPYGTYNLSGTGPAASWYEVARLVYQLTGHN
PQDVSPVTTAEYYAGHEGISPRPAHSTLDLSKLTATGFTPESWTEGLERYLGE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacccccaagcccctgaggatcgagaccacgcccatccctggcttcctgcgt
atcgacctgactgtccacggggacaaccggggctggttcaaggagaactggcagcgcgag
aagatgctggcgctcggcctgccggacttcgggccggtccagaacaacatctccttcaac
gacgaggtgggcgtgacccgcggcatccacgccgagccctgggacaagttcgtctccgtg
gccaccggccgtgtgttcggcgcctgggtggacctgcgtgagggccctaccttcggtacg
gtctacacctgtgagatcgacccctcagtagccgtgtacgtgcccaagggcgtgggcaac
gcctaccagaccctggagcccaacactgcctacacctacctggtgaacgaccactggtcc
cccgaggcccggtataccttcctgaacctggctgacgagacggtggccgtgccctggccc
atccccctggagcaggcgatcctctctgacaaggacaaggcccacccgcgcctggagcag
gtcacgcccttccccgccctgcccgcccggggacgccgcgtgctggtcacgggggccaag
ggccagctgggccgcgagctgatgcgccagctgcccgccgccgggttcacggccaccggc
gtggacctgcccgacttcgacatctccgaccccgccaccgtgcaggcggttgactggtct
gcctacgacgtcgtggtcaacgcggctggctggaccgacgtcgacggggcgcagagcgca
gccggacgtagccaggcatggcaggccaacgccaccggcccggcccacctggcccgcgcc
gccagcaggcacggcctgaccctggtgcacgtctccagcgagtacgtctttgacggcagc
gccgagacccatctggaggacgaggcccccagcccgctgggtgtctacgggcagtcgaag
gccgggggcgacgccgctgccaccgcctgccccacgcactacctggtgcgtaccagctgg
gtcgtgggcgagggccgcaacttcgtgcggaccatggccgagctggcccggcggggcacc
aagccgcaggtagtctgcgaccaggttgggcgcctgaccttcaccaaggacctggctgca
ggcatcatccacctgctgtccacgcaggccccctacggcacctacaacctctctggcacg
ggcccggccgcctcctggtacgaggttgccaggctggtctaccagctcaccgggcacaac
ccgcaggacgtctcccctgtaaccaccgcggagtactacgcaggccatgagggtatctcc
ccccgcccagcccacagcaccctggacctgagcaagctgacggccacgggcttcaccccc
gagagctggaccgagggcctggagcggtacctgggcgagtag
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